RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 PER1O15534 1290 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 HMOX1P09601 288 aa18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 TJP1Q07157 1748 aa18.69■□□□□ 0.58
SDR39U1-214ENST00000555778 NLGN2Q8NFZ4 835 aa18.68■□□□□ 0.58
SDR39U1-214ENST00000555778 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
SDR39U1-214ENST00000555778 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
SDR39U1-214ENST00000555778 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
SDR39U1-214ENST00000555778 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
SDR39U1-214ENST00000555778 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-214ENST00000555778 GNPATO15228 680 aa18.66■□□□□ 0.58
SDR39U1-214ENST00000555778 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
SDR39U1-214ENST00000555778 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
SDR39U1-214ENST00000555778 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
SDR39U1-214ENST00000555778 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
SDR39U1-214ENST00000555778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
SDR39U1-214ENST00000555778 HSP90AB1P08238 724 aaKnown RBP18.64■□□□□ 0.57
SDR39U1-214ENST00000555778 CABP4P57796 275 aa18.64■□□□□ 0.57
SDR39U1-214ENST00000555778 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
SDR39U1-214ENST00000555778 SLC4A9Q96Q91 983 aa18.64■□□□□ 0.57
SDR39U1-214ENST00000555778 CHD4Q14839 1912 aa18.63■□□□□ 0.57
SDR39U1-214ENST00000555778 MRC1P22897 1456 aa18.63■□□□□ 0.57
SDR39U1-214ENST00000555778 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
SDR39U1-214ENST00000555778 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
SDR39U1-214ENST00000555778 ADAMTS7Q9UKP4 1686 aa18.61■□□□□ 0.57
SDR39U1-214ENST00000555778 NPC1L1Q9UHC9 1359 aa18.61■□□□□ 0.57
SDR39U1-214ENST00000555778 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-214ENST00000555778 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-214ENST00000555778 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
SDR39U1-214ENST00000555778 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
SDR39U1-214ENST00000555778 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
SDR39U1-214ENST00000555778 SSFA2P28290 1259 aa18.59■□□□□ 0.57
SDR39U1-214ENST00000555778 GPR162Q16538 588 aa18.59■□□□□ 0.57
SDR39U1-214ENST00000555778 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.56
SDR39U1-214ENST00000555778 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
SDR39U1-214ENST00000555778 LGR6Q9HBX8 967 aa18.57■□□□□ 0.56
SDR39U1-214ENST00000555778 KCPQ6ZWJ8 1503 aa18.57■□□□□ 0.56
SDR39U1-214ENST00000555778 UBR2Q8IWV8 1755 aa18.56■□□□□ 0.56
SDR39U1-214ENST00000555778 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
SDR39U1-214ENST00000555778 AKAP4Q5JQC9 854 aa18.56■□□□□ 0.56
SDR39U1-214ENST00000555778 YBX3P16989 372 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDR39U1-214ENST00000555778 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
SDR39U1-214ENST00000555778 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
SDR39U1-214ENST00000555778 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
SDR39U1-214ENST00000555778 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
SDR39U1-214ENST00000555778 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
SDR39U1-214ENST00000555778 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
SDR39U1-214ENST00000555778 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
SDR39U1-214ENST00000555778 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
SDR39U1-214ENST00000555778 MMP10P09238 476 aa18.52■□□□□ 0.56
SDR39U1-214ENST00000555778 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.56
SDR39U1-214ENST00000555778 HMGB2P26583 209 aaKnown RBP18.51■□□□□ 0.55
SDR39U1-214ENST00000555778 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
SDR39U1-214ENST00000555778 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
SDR39U1-214ENST00000555778 ARHGEF1Q92888 912 aaKnown RBP18.5■□□□□ 0.55
SDR39U1-214ENST00000555778 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
SDR39U1-214ENST00000555778 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
SDR39U1-214ENST00000555778 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
SDR39U1-214ENST00000555778 ZNF784Q8NCA9 323 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-214ENST00000555778 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-214ENST00000555778 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
SDR39U1-214ENST00000555778 CD2APQ9Y5K6 639 aa18.48■□□□□ 0.55
SDR39U1-214ENST00000555778 C10orf71Q711Q0 1435 aa18.48■□□□□ 0.55
SDR39U1-214ENST00000555778 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
SDR39U1-214ENST00000555778 RPS6KA4O75676 772 aa18.47■□□□□ 0.55
SDR39U1-214ENST00000555778 RFC4P35249 363 aa18.47■□□□□ 0.55
SDR39U1-214ENST00000555778 GYS1P13807 737 aa18.46■□□□□ 0.55
SDR39U1-214ENST00000555778 RC3H1Q5TC82 1133 aaKnown RBP18.46■□□□□ 0.55
SDR39U1-214ENST00000555778 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
SDR39U1-214ENST00000555778 ADRA2BP18089 450 aa18.45■□□□□ 0.54
SDR39U1-214ENST00000555778 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
SDR39U1-214ENST00000555778 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.547e-10■■■■■ 29.2
SDR39U1-214ENST00000555778 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 USP42Q9H9J4 1324 aaKnown RBP18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
SDR39U1-214ENST00000555778 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
SDR39U1-214ENST00000555778 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
SDR39U1-214ENST00000555778 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
SDR39U1-214ENST00000555778 COL15A1P39059 1388 aa18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 TEFQ10587 303 aa18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 FKBP8Q14318 412 aa18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 SOS1Q07889 1333 aaPredicted RBP18.42■□□□□ 0.54
SDR39U1-214ENST00000555778 CYP19A1P11511 503 aaPredicted RBP18.41■□□□□ 0.54
SDR39U1-214ENST00000555778 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
SDR39U1-214ENST00000555778 DDR1Q08345 913 aa18.4■□□□□ 0.54
SDR39U1-214ENST00000555778 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
SDR39U1-214ENST00000555778 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
SDR39U1-214ENST00000555778 GRIN3BO60391 1043 aa18.39■□□□□ 0.53
SDR39U1-214ENST00000555778 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
SDR39U1-214ENST00000555778 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-214ENST00000555778 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms