RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
RDH11-207ENST00000554731 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
RDH11-207ENST00000554731 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
RDH11-207ENST00000554731 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
RDH11-207ENST00000554731 PANK3Q9H999 370 aa17.14■□□□□ 0.33
RDH11-207ENST00000554731 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
RDH11-207ENST00000554731 DCAF5Q96JK2 942 aa17.13■□□□□ 0.33
RDH11-207ENST00000554731 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
RDH11-207ENST00000554731 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
RDH11-207ENST00000554731 GPBP1L1Q9HC44 474 aaPredicted RBP17.12■□□□□ 0.33
RDH11-207ENST00000554731 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
RDH11-207ENST00000554731 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
RDH11-207ENST00000554731 KDRP35968 1356 aa17.12■□□□□ 0.33
RDH11-207ENST00000554731 MMP10P09238 476 aa17.11■□□□□ 0.33
RDH11-207ENST00000554731 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
RDH11-207ENST00000554731 ZNF530Q6P9A1 599 aaPredicted RBP17.11■□□□□ 0.33
RDH11-207ENST00000554731 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
RDH11-207ENST00000554731 ADCY9O60503 1353 aa17.1■□□□□ 0.33
RDH11-207ENST00000554731 CABP4P57796 275 aa17.09■□□□□ 0.33
RDH11-207ENST00000554731 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
RDH11-207ENST00000554731 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
RDH11-207ENST00000554731 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
RDH11-207ENST00000554731 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
RDH11-207ENST00000554731 ADRA2BP18089 450 aa17.08■□□□□ 0.32
RDH11-207ENST00000554731 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
RDH11-207ENST00000554731 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
RDH11-207ENST00000554731 MTHFSP49914 203 aa17.07■□□□□ 0.32
RDH11-207ENST00000554731 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
RDH11-207ENST00000554731 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
RDH11-207ENST00000554731 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
RDH11-207ENST00000554731 RFC4P35249 363 aa17.06■□□□□ 0.32
RDH11-207ENST00000554731 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
RDH11-207ENST00000554731 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
RDH11-207ENST00000554731 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
RDH11-207ENST00000554731 ZNF831Q5JPB2 1677 aa17.05■□□□□ 0.32
RDH11-207ENST00000554731 TGFB2P61812 414 aa17.05■□□□□ 0.32
RDH11-207ENST00000554731 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
RDH11-207ENST00000554731 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
RDH11-207ENST00000554731 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
RDH11-207ENST00000554731 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
RDH11-207ENST00000554731 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
RDH11-207ENST00000554731 GYS1P13807 737 aa17.03■□□□□ 0.32
RDH11-207ENST00000554731 PARP3Q9Y6F1 533 aa17.03■□□□□ 0.32
RDH11-207ENST00000554731 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
RDH11-207ENST00000554731 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
RDH11-207ENST00000554731 NFATC2IPQ8NCF5 419 aa17.02■□□□□ 0.32
RDH11-207ENST00000554731 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
RDH11-207ENST00000554731 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
RDH11-207ENST00000554731 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
RDH11-207ENST00000554731 IL13P35225 146 aa17.01■□□□□ 0.31
RDH11-207ENST00000554731 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
RDH11-207ENST00000554731 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
RDH11-207ENST00000554731 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
RDH11-207ENST00000554731 DPEP1P16444 411 aa16.99■□□□□ 0.31
RDH11-207ENST00000554731 HSPA6P17066 643 aa16.99■□□□□ 0.31
RDH11-207ENST00000554731 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
RDH11-207ENST00000554731 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
RDH11-207ENST00000554731 FCHSD2O94868 740 aa16.98■□□□□ 0.31
RDH11-207ENST00000554731 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
RDH11-207ENST00000554731 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
RDH11-207ENST00000554731 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
RDH11-207ENST00000554731 KIF3CO14782 793 aa16.97■□□□□ 0.31
RDH11-207ENST00000554731 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
RDH11-207ENST00000554731 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
RDH11-207ENST00000554731 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
RDH11-207ENST00000554731 FKBP8Q14318 412 aa16.96■□□□□ 0.31
RDH11-207ENST00000554731 CEP350Q5VT06 3117 aa16.96■□□□□ 0.31
RDH11-207ENST00000554731 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
RDH11-207ENST00000554731 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
RDH11-207ENST00000554731 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
RDH11-207ENST00000554731 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
RDH11-207ENST00000554731 TJP1Q07157 1748 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
RDH11-207ENST00000554731 ZPR1O75312 459 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 HMOX1P09601 288 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 KCNA3P22001 575 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 DDR1Q08345 913 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 LGR6Q9HBX8 967 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
RDH11-207ENST00000554731 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
RDH11-207ENST00000554731 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
RDH11-207ENST00000554731 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
RDH11-207ENST00000554731 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
RDH11-207ENST00000554731 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
RDH11-207ENST00000554731 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
RDH11-207ENST00000554731 TOMM70O94826 608 aa16.9■□□□□ 0.3
RDH11-207ENST00000554731 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
RDH11-207ENST00000554731 TM4SF1P30408 202 aa16.9■□□□□ 0.3
RDH11-207ENST00000554731 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
RDH11-207ENST00000554731 MRC1P22897 1456 aa16.9■□□□□ 0.3
RDH11-207ENST00000554731 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
RDH11-207ENST00000554731 USPL1Q5W0Q7 1092 aa16.89■□□□□ 0.29
RDH11-207ENST00000554731 CHRNA5P30532 468 aa16.88■□□□□ 0.29
RDH11-207ENST00000554731 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
RDH11-207ENST00000554731 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
RDH11-207ENST00000554731 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
RDH11-207ENST00000554731 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
RDH11-207ENST00000554731 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
RDH11-207ENST00000554731 APLP1P51693 650 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms