RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 FLT4P35916 1363 aa11.91□□□□□ -0.5
HNRNPC-212ENST00000554539 ITGB4P16144 1822 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 CEP350Q5VT06 3117 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 TMF1P82094 1093 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 RRAGCQ9HB90 399 aa11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-212ENST00000554539 PHKG2P15735 406 aa11.89□□□□□ -0.51
HNRNPC-212ENST00000554539 TGFB2P61812 414 aa11.89□□□□□ -0.51
HNRNPC-212ENST00000554539 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-212ENST00000554539 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
HNRNPC-212ENST00000554539 KCNA3P22001 575 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 CHRNA5P30532 468 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 RFC4P35249 363 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 SRP68Q9UHB9 627 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 CICQ96RK0 1608 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-212ENST00000554539 GYS1P13807 737 aa11.87□□□□□ -0.51
HNRNPC-212ENST00000554539 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-212ENST00000554539 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
HNRNPC-212ENST00000554539 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
HNRNPC-212ENST00000554539 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-212ENST00000554539 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
HNRNPC-212ENST00000554539 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-212ENST00000554539 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
HNRNPC-212ENST00000554539 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
HNRNPC-212ENST00000554539 FKBP8Q14318 412 aa11.85□□□□□ -0.51
HNRNPC-212ENST00000554539 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-212ENST00000554539 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 CABP4P57796 275 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 DDR1Q08345 913 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 PIM2Q9P1W9 311 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
HNRNPC-212ENST00000554539 RASSF7Q02833 373 aa11.83□□□□□ -0.52
HNRNPC-212ENST00000554539 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-212ENST00000554539 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
HNRNPC-212ENST00000554539 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
HNRNPC-212ENST00000554539 PKD1L3Q7Z443 1732 aa11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 ZNF530Q6P9A1 599 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
HNRNPC-212ENST00000554539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.524e-12■■■□□ 16.5
HNRNPC-212ENST00000554539 KDRP35968 1356 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 PRELPP51888 382 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
HNRNPC-212ENST00000554539 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 MTHFSP49914 203 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 FSTL1Q12841 308 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
HNRNPC-212ENST00000554539 C4AP0C0L4 1744 aa11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 ADRA2BP18089 450 aa11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 DNAJC10Q8IXB1 793 aa11.78□□□□□ -0.52
HNRNPC-212ENST00000554539 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
HNRNPC-212ENST00000554539 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
HNRNPC-212ENST00000554539 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 INTS5Q6P9B9 1019 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-212ENST00000554539 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-212ENST00000554539 TM4SF1P30408 202 aa11.76□□□□□ -0.53
HNRNPC-212ENST00000554539 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
HNRNPC-212ENST00000554539 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
HNRNPC-212ENST00000554539 ZPR1O75312 459 aa11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 NFIXQ14938 502 aa11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 LGR6Q9HBX8 967 aa11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 PLEKHG2Q9H7P9 1386 aa11.75□□□□□ -0.53
HNRNPC-212ENST00000554539 SULT6B1Q6IMI4 303 aa11.74□□□□□ -0.53
HNRNPC-212ENST00000554539 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 POTECB2RU33 542 aa11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 VEGFAP15692 232 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 BRCA1P38398 1863 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-212ENST00000554539 SERPINB2P05120 415 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms