RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 TMEM214Q6NUQ4 689 aaKnown RBP7.38□□□□□ -1.23
PCNX4-206ENST00000553513 USP17L2Q6R6M4 530 aa7.38□□□□□ -1.23
PCNX4-206ENST00000553513 USP17L1Q7RTZ2 530 aa7.38□□□□□ -1.23
PCNX4-206ENST00000553513 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
PCNX4-206ENST00000553513 CALR3Q96L12 384 aaKnown RBP7.38□□□□□ -1.23
PCNX4-206ENST00000553513 FHDC1Q9C0D6 1143 aaPredicted RBP7.38□□□□□ -1.23
PCNX4-206ENST00000553513 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
PCNX4-206ENST00000553513 PCDHGA11Q9Y5H2 935 aa7.38□□□□□ -1.23
PCNX4-206ENST00000553513 CDC14CA4D256 554 aa7.37□□□□□ -1.23
PCNX4-206ENST00000553513 PSME1Q06323 249 aa7.37□□□□□ -1.23
PCNX4-206ENST00000553513 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
PCNX4-206ENST00000553513 ATP1A2P50993 1020 aa7.36□□□□□ -1.23
PCNX4-206ENST00000553513 SV2AQ7L0J3 742 aa7.36□□□□□ -1.23
PCNX4-206ENST00000553513 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
PCNX4-206ENST00000553513 TMEM229AB2RXF0 380 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 BACH1O14867 736 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 SMTNP53814 917 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 RIPOR1Q6ZS17 1223 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 PPARGC1BQ86YN6 1023 aaKnown RBP7.35□□□□□ -1.23
PCNX4-206ENST00000553513 HOMEZQ8IX15 550 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 RHBDD1Q8TEB9 315 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 GAS2L1Q99501 681 aaPredicted RBP7.35□□□□□ -1.23
PCNX4-206ENST00000553513 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
PCNX4-206ENST00000553513 H7C1W4 665 aa7.34□□□□□ -1.23
PCNX4-206ENST00000553513 PHKA2P46019 1235 aa7.34□□□□□ -1.23
PCNX4-206ENST00000553513 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
PCNX4-206ENST00000553513 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
PCNX4-206ENST00000553513 SLC4A9Q96Q91 983 aa7.34□□□□□ -1.23
PCNX4-206ENST00000553513 TFIP11Q9UBB9 837 aaKnown RBP7.34□□□□□ -1.23
PCNX4-206ENST00000553513 A0A1B0GTH6 734 aa7.33□□□□□ -1.24
PCNX4-206ENST00000553513 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 F11P03951 625 aa7.33□□□□□ -1.24
PCNX4-206ENST00000553513 GPR161Q8N6U8 529 aaKnown RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
PCNX4-206ENST00000553513 CUEDC1Q9NWM3 386 aaPredicted RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 MKRN1Q9UHC7 482 aaKnown RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 ZNF777Q9ULD5 760 aaPredicted RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 MAFBQ9Y5Q3 323 aaPredicted RBP7.33□□□□□ -1.24
PCNX4-206ENST00000553513 A6NJY4 79 aa7.32□□□□□ -1.24
PCNX4-206ENST00000553513 MTFR1Q15390 333 aa7.32□□□□□ -1.24
PCNX4-206ENST00000553513 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
PCNX4-206ENST00000553513 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
PCNX4-206ENST00000553513 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
PCNX4-206ENST00000553513 ZNF358Q9NW07 568 aa7.32□□□□□ -1.24
PCNX4-206ENST00000553513 CDK2AP1O14519 115 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 CLDN10P78369 228 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 LARGE2Q8N3Y3 721 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
PCNX4-206ENST00000553513 TPCN2Q8NHX9 752 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
PCNX4-206ENST00000553513 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
PCNX4-206ENST00000553513 ZMYND15Q9H091 742 aa7.31□□□□□ -1.24
PCNX4-206ENST00000553513 RBM19Q9Y4C8 960 aaKnown RBP7.31□□□□□ -1.24
PCNX4-206ENST00000553513 ZBTB7BO15156 539 aaPredicted RBP7.3□□□□□ -1.24
PCNX4-206ENST00000553513 PLA2G4AP47712 749 aa7.3□□□□□ -1.24
PCNX4-206ENST00000553513 DBN1Q16643 649 aa7.3□□□□□ -1.24
PCNX4-206ENST00000553513 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
PCNX4-206ENST00000553513 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
PCNX4-206ENST00000553513 NUCKS1Q9H1E3 243 aaKnown RBP7.3□□□□□ -1.24
PCNX4-206ENST00000553513 GPAMQ9HCL2 828 aa7.3□□□□□ -1.24
PCNX4-206ENST00000553513 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 SIX5Q8N196 739 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 CNTNAP3BQ96NU0 1288 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 STK17AQ9UEE5 414 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 IQSEC3Q9UPP2 1182 aaPredicted RBP7.29□□□□□ -1.24
PCNX4-206ENST00000553513 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
PCNX4-206ENST00000553513 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
PCNX4-206ENST00000553513 RASA1P20936 1047 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 MSX1P28360 303 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 KRT76Q01546 638 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 LBRQ14739 615 aaKnown RBP7.28□□□□□ -1.24
PCNX4-206ENST00000553513 LARP1Q6PKG0 1096 aaKnown RBP7.28□□□□□ -1.24
PCNX4-206ENST00000553513 C1orf216Q8TAB5 229 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
PCNX4-206ENST00000553513 TRERF1Q96PN7 1200 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 CABP1Q9NZU7 370 aa7.28□□□□□ -1.24
PCNX4-206ENST00000553513 SCHIP1Q9P0W5 487 aaPredicted RBP7.28□□□□□ -1.24
PCNX4-206ENST00000553513 FAM181BA6NEQ2 426 aa7.27□□□□□ -1.25
PCNX4-206ENST00000553513 M0R2N6 131 aa7.27□□□□□ -1.25
PCNX4-206ENST00000553513 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
PCNX4-206ENST00000553513 NBPF1Q3BBV0 1214 aa7.27□□□□□ -1.25
PCNX4-206ENST00000553513 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
PCNX4-206ENST00000553513 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
PCNX4-206ENST00000553513 AIDAQ96BJ3 306 aa7.27□□□□□ -1.25
PCNX4-206ENST00000553513 EPHA4P54764 986 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 EFHC2Q5JST6 749 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 TNS4Q8IZW8 715 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 ZNF295-AS1Q8N0V1 137 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 RUBCNLQ9H714 662 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 USP3Q9Y6I4 520 aa7.26□□□□□ -1.25
PCNX4-206ENST00000553513 GPR25O00155 361 aa7.25□□□□□ -1.25
PCNX4-206ENST00000553513 TATP17735 454 aaPredicted RBP7.25□□□□□ -1.25
PCNX4-206ENST00000553513 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
PCNX4-206ENST00000553513 FOXK2Q01167 660 aa7.25□□□□□ -1.25
PCNX4-206ENST00000553513 GAS6Q14393 721 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms