RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 CALCOCO2Q13137 446 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 C10orf67Q8IYJ2 551 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 FNBP4Q8N3X1 1017 aaPredicted RBP9.04□□□□□ -0.96
CEP290-207ENST00000552810 OTUD6BQ8N6M0 293 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 UIMC1Q96RL1 719 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 PDZRN3Q9UPQ7 1066 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 SAFBQ15424 915 aaKnown RBP eCLIP9.04□□□□□ -0.96
CEP290-207ENST00000552810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.04□□□□□ -0.96
CEP290-207ENST00000552810 FRMD4BQ9Y2L6 1034 aa9.04□□□□□ -0.96
CEP290-207ENST00000552810 MINK1Q8N4C8 1332 aaPredicted RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 DIAPH1O60610 1272 aaKnown RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 IFFO1Q0D2I5 559 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 FAM114A2Q9NRY5 505 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 CEP162Q5TB80 1403 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 RIPK4P57078 832 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 AAMPQ13685 434 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 CCDC144CPQ8IYA2 1237 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 CLIP1P30622 1438 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 ARHGAP25P42331 645 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 NBPF9Q3BBW0 867 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 KINO60870 393 aaKnown RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 HYPKQ9NX55 129 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 GMNNO75496 209 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 CASQ1P31415 396 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 FOXD4Q12950 439 aaPredicted RBP9.03□□□□□ -0.96
CEP290-207ENST00000552810 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
CEP290-207ENST00000552810 GSTTP1A0A1W2PQM5 241 aa9.02□□□□□ -0.96
CEP290-207ENST00000552810 BCAR3O75815 825 aa9.02□□□□□ -0.96
CEP290-207ENST00000552810 GBP3Q9H0R5 595 aa9.02□□□□□ -0.96
CEP290-207ENST00000552810 KIF5AQ12840 1032 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 TSNARE1Q96NA8 513 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 ITM2BQ9Y287 266 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 MXRA7P84157 204 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 FILIP1LQ4L180 1135 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
CEP290-207ENST00000552810 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 MICALCLQ6ZW33 695 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 BAG1Q99933 345 aaPredicted RBP9.02□□□□□ -0.97
CEP290-207ENST00000552810 TSR2Q969E8 191 aaKnown RBP9.02□□□□□ -0.97
CEP290-207ENST00000552810 TMEM110-MUSTN1A8MSY1 372 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 DCAF1Q9Y4B6 1507 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 RBM5P52756 815 aaKnown RBP eCLIP9.02□□□□□ -0.97
CEP290-207ENST00000552810 HOOK3Q86VS8 718 aa9.02□□□□□ -0.97
CEP290-207ENST00000552810 MGEA5O60502 916 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 CUL4BQ13620 913 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 CTR9Q6PD62 1173 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 PIK3R5Q8WYR1 880 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 NOC2LQ9Y3T9 749 aaKnown RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 IRX5P78411 483 aaPredicted RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 CEP83Q9Y592 693 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 ANAPC4Q9UJX5 808 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 IKBKGQ9Y6K9 419 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 TXLNAP40222 546 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 PDCD2Q16342 344 aaPredicted RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 CCDC158Q5M9N0 1113 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
CEP290-207ENST00000552810 NLRP9Q7RTR0 991 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 SPC25Q9HBM1 224 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 SATB2Q9UPW6 733 aa9.01□□□□□ -0.97
CEP290-207ENST00000552810 PPFIA2O75334 1257 aa9□□□□□ -0.97
CEP290-207ENST00000552810 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 INAQ16352 499 aa9□□□□□ -0.97
CEP290-207ENST00000552810 ACBD5Q5T8D3 534 aaPredicted RBP9□□□□□ -0.97
CEP290-207ENST00000552810 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 PPP1R14CQ8TAE6 165 aa9□□□□□ -0.97
CEP290-207ENST00000552810 ERMNQ8TAM6 284 aa9□□□□□ -0.97
CEP290-207ENST00000552810 SPECC1L-ADORA2AF8WAN1 911 aa9□□□□□ -0.97
CEP290-207ENST00000552810 CFAP100Q494V2 611 aa9□□□□□ -0.97
CEP290-207ENST00000552810 IL1RAPL2Q9NP60 686 aa9□□□□□ -0.97
CEP290-207ENST00000552810 SUFUQ9UMX1 484 aa9□□□□□ -0.97
CEP290-207ENST00000552810 RNF8O76064 485 aa9□□□□□ -0.97
CEP290-207ENST00000552810 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 NAT10Q9H0A0 1025 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 WDHD1O75717 1129 aaPredicted RBP9□□□□□ -0.97
CEP290-207ENST00000552810 HLTFQ14527 1009 aaKnown RBP eCLIP9□□□□□ -0.97
CEP290-207ENST00000552810 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 TEFQ10587 303 aa9□□□□□ -0.97
CEP290-207ENST00000552810 AKNAD1Q5T1N1 836 aa9□□□□□ -0.97
CEP290-207ENST00000552810 RBM42Q9BTD8 480 aaKnown RBP9□□□□□ -0.97
CEP290-207ENST00000552810 ANLNQ9NQW6 1124 aa9□□□□□ -0.97
CEP290-207ENST00000552810 KIF22Q14807 665 aa9□□□□□ -0.97
CEP290-207ENST00000552810 NANOGNBQ7Z5D8 188 aa9□□□□□ -0.97
CEP290-207ENST00000552810 INPP1P49441 399 aa8.99□□□□□ -0.97
CEP290-207ENST00000552810 BLVRAP53004 296 aa8.99□□□□□ -0.97
CEP290-207ENST00000552810 TTC5Q8N0Z6 440 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1387.2 ms