RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
TGFBR1-209ENST00000552516 ABCF2Q9UG63 623 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
TGFBR1-209ENST00000552516 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
TGFBR1-209ENST00000552516 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
TGFBR1-209ENST00000552516 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
TGFBR1-209ENST00000552516 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
TGFBR1-209ENST00000552516 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
TGFBR1-209ENST00000552516 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 VPS53Q5VIR6 699 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 MCM4P33991 863 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 PHF14O94880 888 aa12.98□□□□□ -0.33
TGFBR1-209ENST00000552516 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 KCNQ4P56696 695 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 NUCB1Q02818 461 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 TTC39AQ5SRH9 613 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 CCDC144CPQ8IYA2 1237 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 CAMK4Q16566 473 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 ZBTB7BO15156 539 aaPredicted RBP12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 SPC24Q8NBT2 197 aa12.97□□□□□ -0.33
TGFBR1-209ENST00000552516 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 ZNF592Q92610 1267 aa12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
TGFBR1-209ENST00000552516 KDM5CP41229 1560 aa12.96□□□□□ -0.34
TGFBR1-209ENST00000552516 MSH6P52701 1360 aa12.96□□□□□ -0.34
TGFBR1-209ENST00000552516 GOLIM4O00461 696 aa12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 RABEP1Q15276 862 aa12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
TGFBR1-209ENST00000552516 TRDNQ13061 729 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 A1BGP04217 495 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 MPHOSPH8Q99549 860 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 SYCE3A1L190 88 aa12.94□□□□□ -0.34
TGFBR1-209ENST00000552516 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 PDE1AP54750 535 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 USP19O94966 1318 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
TGFBR1-209ENST00000552516 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 NUCB2P80303 420 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 PDRG1Q9NUG6 133 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 PLEKHM2Q8IWE5 1019 aa12.92□□□□□ -0.34
TGFBR1-209ENST00000552516 KIAA2012Q0VF49 1180 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 TIMM10P62072 90 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 C8orf37Q96NL8 207 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 PHF23Q9BUL5 403 aaPredicted RBP12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 BECN2A8MW95 431 aa12.91□□□□□ -0.34
TGFBR1-209ENST00000552516 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms