RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 RAPGEF2Q9Y4G8 1499 aa8.86□□□□□ -0.99
PFDN5-209ENST00000550069 FIGNL2A6NMB9 653 aa8.86□□□□□ -0.99
PFDN5-209ENST00000550069 ATP5J2-PTCD1G3V325 749 aa8.86□□□□□ -0.99
PFDN5-209ENST00000550069 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
PFDN5-209ENST00000550069 C1orf115Q9H7X2 142 aa8.85□□□□□ -0.99
PFDN5-209ENST00000550069 TFIP11Q9UBB9 837 aaKnown RBP8.85□□□□□ -0.99
PFDN5-209ENST00000550069 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
PFDN5-209ENST00000550069 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
PFDN5-209ENST00000550069 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 UPP2O95045 317 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 IL2RAP01589 272 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
PFDN5-209ENST00000550069 PRXQ9BXM0 1461 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
PFDN5-209ENST00000550069 TTLL8A6PVC2 850 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 MEN1O00255 615 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 ATP9BO43861 1147 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 RNF217Q8TC41 542 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 ETNK1Q9HBU6 452 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 POLMQ9NP87 494 aaPredicted RBP8.83□□□□□ -1
PFDN5-209ENST00000550069 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
PFDN5-209ENST00000550069 CEP170Q5SW79 1584 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 SCNN1DP51172 638 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 LCE2CQ5TA81 110 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 CYP2U1Q7Z449 544 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 NFATC2IPQ8NCF5 419 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 KIFC2Q96AC6 838 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 ZNF775Q96BV0 537 aaPredicted RBP8.82□□□□□ -1
PFDN5-209ENST00000550069 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 MAFBQ9Y5Q3 323 aaPredicted RBP8.82□□□□□ -1
PFDN5-209ENST00000550069 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
PFDN5-209ENST00000550069 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
PFDN5-209ENST00000550069 VEGFBP49765 207 aa8.81□□□□□ -1
PFDN5-209ENST00000550069 CFAP70Q5T0N1 1121 aa8.81□□□□□ -1
PFDN5-209ENST00000550069 CCDC125Q86Z20 511 aa8.81□□□□□ -1
PFDN5-209ENST00000550069 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
PFDN5-209ENST00000550069 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
PFDN5-209ENST00000550069 MAN1A2O60476 641 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 CLDN10P78369 228 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 USP4Q13107 963 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 HRH3Q9Y5N1 445 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 IQGAP2Q13576 1575 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 KIF21BO75037 1637 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
PFDN5-209ENST00000550069 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
PFDN5-209ENST00000550069 CLN3Q13286 438 aa8.79□□□□□ -1
PFDN5-209ENST00000550069 EML3Q32P44 896 aa8.79□□□□□ -1
PFDN5-209ENST00000550069 FAM9AQ8IZU1 332 aaPredicted RBP8.79□□□□□ -1
PFDN5-209ENST00000550069 GOLGA3Q08378 1498 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 RHOQP17081 205 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 GTF2IP78347 998 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 CNKSR1Q969H4 720 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 UGGT2Q9NYU1 1516 aa8.78□□□□□ -1
PFDN5-209ENST00000550069 ZBTB7BO15156 539 aaPredicted RBP8.77□□□□□ -1.01
PFDN5-209ENST00000550069 GNRH1P01148 92 aa8.77□□□□□ -1.01
PFDN5-209ENST00000550069 PRICKLE2Q7Z3G6 844 aa8.77□□□□□ -1.01
PFDN5-209ENST00000550069 FHDC1Q9C0D6 1143 aaPredicted RBP8.77□□□□□ -1.01
PFDN5-209ENST00000550069 USP3Q9Y6I4 520 aa8.77□□□□□ -1.01
PFDN5-209ENST00000550069 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
PFDN5-209ENST00000550069 LMOD1P29536 600 aaPredicted RBP8.76□□□□□ -1.01
PFDN5-209ENST00000550069 GDF10P55107 478 aa8.76□□□□□ -1.01
PFDN5-209ENST00000550069 CDCA8Q53HL2 280 aa8.76□□□□□ -1.01
PFDN5-209ENST00000550069 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
PFDN5-209ENST00000550069 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
PFDN5-209ENST00000550069 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
PFDN5-209ENST00000550069 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
PFDN5-209ENST00000550069 DKK1O94907 266 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 RFX1P22670 979 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 RNF144AP50876 292 aaPredicted RBP8.75□□□□□ -1.01
PFDN5-209ENST00000550069 CENPCQ03188 943 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 PTSQ03393 145 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
PFDN5-209ENST00000550069 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.75□□□□□ -1.01
PFDN5-209ENST00000550069 ESYT1Q9BSJ8 1104 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 SERTAD1Q9UHV2 236 aa8.75□□□□□ -1.01
PFDN5-209ENST00000550069 INHAP05111 366 aa8.74□□□□□ -1.01
PFDN5-209ENST00000550069 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
PFDN5-209ENST00000550069 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
PFDN5-209ENST00000550069 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
PFDN5-209ENST00000550069 PRG4Q92954 1404 aaPredicted RBP8.73□□□□□ -1.01
PFDN5-209ENST00000550069 ARAP1Q96P48 1450 aa8.73□□□□□ -1.01
PFDN5-209ENST00000550069 POU4F2Q12837 409 aa8.73□□□□□ -1.01
PFDN5-209ENST00000550069 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
PFDN5-209ENST00000550069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.013e-7■■□□□ 13.4
PFDN5-209ENST00000550069 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
PFDN5-209ENST00000550069 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
PFDN5-209ENST00000550069 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
PFDN5-209ENST00000550069 PSME1Q06323 249 aa8.72□□□□□ -1.01
PFDN5-209ENST00000550069 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
PFDN5-209ENST00000550069 LYSMD3Q7Z3D4 306 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms