RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
BRF1-215ENST00000549655 SIRT2Q8IXJ6 389 aa24.09■■□□□ 1.45
BRF1-215ENST00000549655 F6X3S4 739 aa24.09■■□□□ 1.45
BRF1-215ENST00000549655 KCNQ3O43525 872 aa24.09■■□□□ 1.45
BRF1-215ENST00000549655 FLIIQ13045 1269 aa24.09■■□□□ 1.45
BRF1-215ENST00000549655 HDGFL1Q5TGJ6 251 aa24.09■■□□□ 1.45
BRF1-215ENST00000549655 IPO9Q96P70 1041 aaKnown RBP24.07■■□□□ 1.44
BRF1-215ENST00000549655 PRDM11Q9NQV5 511 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 MEGF6O75095 1541 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 HOXB7P09629 217 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 NUCB1Q02818 461 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 SLC4A10Q6U841 1118 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 SPG7Q9UQ90 795 aa24.07■■□□□ 1.44
BRF1-215ENST00000549655 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
BRF1-215ENST00000549655 FKBP5Q13451 457 aaPredicted RBP24.06■■□□□ 1.44
BRF1-215ENST00000549655 GCC1Q96CN9 775 aa24.06■■□□□ 1.44
BRF1-215ENST00000549655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.06■■□□□ 1.44
BRF1-215ENST00000549655 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
BRF1-215ENST00000549655 MEIS3Q99687 375 aa24.04■■□□□ 1.44
BRF1-215ENST00000549655 EIF2S2P20042 333 aaKnown RBP24.03■■□□□ 1.44
BRF1-215ENST00000549655 NHSL1Q5SYE7 1610 aa24.03■■□□□ 1.44
BRF1-215ENST00000549655 PHKG2P15735 406 aa24.03■■□□□ 1.44
BRF1-215ENST00000549655 CHD1LQ86WJ1 897 aa24.03■■□□□ 1.44
BRF1-215ENST00000549655 CHMP4AQ9BY43 222 aa24.03■■□□□ 1.44
BRF1-215ENST00000549655 SIPA1L3O60292 1781 aaPredicted RBP24.03■■□□□ 1.44
BRF1-215ENST00000549655 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
BRF1-215ENST00000549655 LNPKQ9C0E8 428 aa24.02■■□□□ 1.43
BRF1-215ENST00000549655 ANKRD44Q8N8A2 993 aa24.01■■□□□ 1.43
BRF1-215ENST00000549655 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
BRF1-215ENST00000549655 ANKRD45Q5TZF3 282 aa24■■□□□ 1.43
BRF1-215ENST00000549655 RPAP2Q8IXW5 612 aaPredicted RBP24■■□□□ 1.43
BRF1-215ENST00000549655 IFNL2Q8IZJ0 200 aa24■■□□□ 1.43
BRF1-215ENST00000549655 ABCA3Q99758 1704 aa24■■□□□ 1.43
BRF1-215ENST00000549655 WDR17Q8IZU2 1322 aa24■■□□□ 1.43
BRF1-215ENST00000549655 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
BRF1-215ENST00000549655 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
BRF1-215ENST00000549655 CEP85Q6P2H3 762 aa23.99■■□□□ 1.43
BRF1-215ENST00000549655 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
BRF1-215ENST00000549655 CHPF2Q9P2E5 772 aa23.98■■□□□ 1.43
BRF1-215ENST00000549655 HEG1Q9ULI3 1381 aa23.98■■□□□ 1.43
BRF1-215ENST00000549655 GIGYF1O75420 1035 aaPredicted RBP23.98■■□□□ 1.43
BRF1-215ENST00000549655 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
BRF1-215ENST00000549655 PKD1L3Q7Z443 1732 aa23.97■■□□□ 1.43
BRF1-215ENST00000549655 TOM1L2Q6ZVM7 507 aa23.97■■□□□ 1.43
BRF1-215ENST00000549655 CYP27B1O15528 508 aa23.96■■□□□ 1.43
BRF1-215ENST00000549655 DCTPP1Q9H773 170 aa23.96■■□□□ 1.43
BRF1-215ENST00000549655 COL5A2P05997 1499 aaPredicted RBP23.96■■□□□ 1.43
BRF1-215ENST00000549655 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
BRF1-215ENST00000549655 PXDNLA1KZ92 1463 aa23.95■■□□□ 1.42
BRF1-215ENST00000549655 DCAF5Q96JK2 942 aa23.95■■□□□ 1.42
BRF1-215ENST00000549655 ERICH6Q7L0X2 663 aa23.94■■□□□ 1.42
BRF1-215ENST00000549655 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
BRF1-215ENST00000549655 SEC24BO95487 1268 aa23.94■■□□□ 1.42
BRF1-215ENST00000549655 ZBTB47Q9UFB7 747 aaPredicted RBP23.94■■□□□ 1.42
BRF1-215ENST00000549655 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
BRF1-215ENST00000549655 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
BRF1-215ENST00000549655 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
BRF1-215ENST00000549655 GNAI2P04899 355 aa23.92■■□□□ 1.42
BRF1-215ENST00000549655 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
BRF1-215ENST00000549655 ANXA1P04083 346 aa23.92■■□□□ 1.42
BRF1-215ENST00000549655 GNAI3P08754 354 aa23.92■■□□□ 1.42
BRF1-215ENST00000549655 SLC39A6Q13433 755 aa23.92■■□□□ 1.42
BRF1-215ENST00000549655 PRAMEF22A3QJZ6 481 aa23.91■■□□□ 1.42
BRF1-215ENST00000549655 CARD10Q9BWT7 1032 aa23.91■■□□□ 1.42
BRF1-215ENST00000549655 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
BRF1-215ENST00000549655 DDRGK1Q96HY6 314 aa23.9■■□□□ 1.42
BRF1-215ENST00000549655 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
BRF1-215ENST00000549655 MRC1P22897 1456 aa23.9■■□□□ 1.42
BRF1-215ENST00000549655 HMMRO75330 724 aa23.89■■□□□ 1.42
BRF1-215ENST00000549655 EVA1CP58658 441 aa23.89■■□□□ 1.42
BRF1-215ENST00000549655 LARP1Q6PKG0 1096 aaKnown RBP23.89■■□□□ 1.41
BRF1-215ENST00000549655 ZCRB1Q8TBF4 217 aaKnown RBP23.89■■□□□ 1.41
BRF1-215ENST00000549655 PI4KAP2A4QPH2 592 aa23.88■■□□□ 1.41
BRF1-215ENST00000549655 PI4KAP1Q8N8J0 262 aa23.88■■□□□ 1.41
BRF1-215ENST00000549655 USP44Q9H0E7 712 aa23.88■■□□□ 1.41
BRF1-215ENST00000549655 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
BRF1-215ENST00000549655 PROSER3Q2NL68 480 aa23.87■■□□□ 1.41
BRF1-215ENST00000549655 DNAAF4Q8WXU2 420 aa23.87■■□□□ 1.41
BRF1-215ENST00000549655 SRCIN1Q9C0H9 1055 aa23.87■■□□□ 1.41
BRF1-215ENST00000549655 PCDH11XQ9BZA7 1347 aa23.87■■□□□ 1.41
BRF1-215ENST00000549655 PCDH11YQ9BZA8 1340 aa23.87■■□□□ 1.41
BRF1-215ENST00000549655 IL2RBP14784 551 aa23.86■■□□□ 1.41
BRF1-215ENST00000549655 ADCY9O60503 1353 aa23.86■■□□□ 1.41
BRF1-215ENST00000549655 CABP4P57796 275 aa23.85■■□□□ 1.41
BRF1-215ENST00000549655 ZNF496Q96IT1 587 aaPredicted RBP23.85■■□□□ 1.41
BRF1-215ENST00000549655 HYPKQ9NX55 129 aa23.85■■□□□ 1.41
BRF1-215ENST00000549655 UBTFL1P0CB47 393 aaPredicted RBP23.84■■□□□ 1.41
BRF1-215ENST00000549655 BMP2KLQ5H9B9 411 aa23.84■■□□□ 1.41
BRF1-215ENST00000549655 BEND3Q5T5X7 828 aa23.84■■□□□ 1.41
BRF1-215ENST00000549655 TTC5Q8N0Z6 440 aa23.84■■□□□ 1.41
BRF1-215ENST00000549655 ANP32EQ9BTT0 268 aa23.84■■□□□ 1.41
BRF1-215ENST00000549655 UPF2Q9HAU5 1272 aaKnown RBP23.84■■□□□ 1.41
BRF1-215ENST00000549655 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
BRF1-215ENST00000549655 DDX21Q9NR30 783 aaKnown RBP eCLIP23.83■■□□□ 1.41
BRF1-215ENST00000549655 LRRFIP2Q9Y608 721 aaKnown RBP23.83■■□□□ 1.41
BRF1-215ENST00000549655 C5P01031 1676 aa23.82■■□□□ 1.4
BRF1-215ENST00000549655 ATP8B2P98198 1209 aa23.82■■□□□ 1.4
BRF1-215ENST00000549655 AHDC1Q5TGY3 1603 aaPredicted RBP23.82■■□□□ 1.4
BRF1-215ENST00000549655 PDIA6Q15084 440 aa23.82■■□□□ 1.4
BRF1-215ENST00000549655 APBB1O00213 710 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms