RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 SIX5Q8N196 739 aa7.66□□□□□ -1.18
MRPL42-205ENST00000549561 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
MRPL42-205ENST00000549561 PPFIA3O75145 1194 aa7.65□□□□□ -1.18
MRPL42-205ENST00000549561 SMTNP53814 917 aa7.65□□□□□ -1.18
MRPL42-205ENST00000549561 MTFR1Q15390 333 aa7.65□□□□□ -1.18
MRPL42-205ENST00000549561 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
MRPL42-205ENST00000549561 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
MRPL42-205ENST00000549561 ZSCAN10Q96SZ4 725 aaPredicted RBP7.65□□□□□ -1.18
MRPL42-205ENST00000549561 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.18
MRPL42-205ENST00000549561 ZNF358Q9NW07 568 aa7.65□□□□□ -1.18
MRPL42-205ENST00000549561 ARID3CA6NKF2 412 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 PSME1Q06323 249 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 POU4F2Q12837 409 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 TLR1Q15399 786 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 PPARGC1BQ86YN6 1023 aaKnown RBP7.64□□□□□ -1.19
MRPL42-205ENST00000549561 CCDC155Q8N6L0 562 aa7.64□□□□□ -1.19
MRPL42-205ENST00000549561 M0R2N6 131 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 BACH1O14867 736 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 RHOQP17081 205 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 RASA1P20936 1047 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 VEGFBP49765 207 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 EPHA4P54764 986 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 PTK7Q13308 1070 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 CCDC102BQ68D86 513 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 TAS1R3Q7RTX0 852 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.63□□□□□ -1.19
MRPL42-205ENST00000549561 TPCN2Q8NHX9 752 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 SERTAD1Q9UHV2 236 aa7.63□□□□□ -1.19
MRPL42-205ENST00000549561 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
MRPL42-205ENST00000549561 A6NJY4 79 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 FAM196BA6NMK8 535 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 SRPK2P78362 688 aaKnown RBP7.62□□□□□ -1.19
MRPL42-205ENST00000549561 CRTC2Q53ET0 693 aaPredicted RBP7.62□□□□□ -1.19
MRPL42-205ENST00000549561 RHBDD1Q8TEB9 315 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 SERPINA10Q9UK55 444 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 DYRK1BQ9Y463 629 aa7.62□□□□□ -1.19
MRPL42-205ENST00000549561 ITGA6P23229 1130 aa7.61□□□□□ -1.19
MRPL42-205ENST00000549561 INSM1Q01101 510 aaPredicted RBP7.61□□□□□ -1.19
MRPL42-205ENST00000549561 FOXK2Q01167 660 aa7.61□□□□□ -1.19
MRPL42-205ENST00000549561 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
MRPL42-205ENST00000549561 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
MRPL42-205ENST00000549561 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
MRPL42-205ENST00000549561 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L15C9J2P7 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L10C9JJH3 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L13C9JLJ4 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L12C9JPN9 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L11C9JVI0 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L21D6R901 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L18D6R9N7 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L22D6RA61 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L17D6RBQ6 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L19D6RCP7 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L20D6RJB6 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 WIPF1O43516 503 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP17L24Q0WX57 530 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 GNASQ5JWF2 1037 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
MRPL42-205ENST00000549561 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
MRPL42-205ENST00000549561 ZNF594Q96JF6 807 aaPredicted RBP7.6□□□□□ -1.19
MRPL42-205ENST00000549561 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
MRPL42-205ENST00000549561 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
MRPL42-205ENST00000549561 RFX1P22670 979 aa7.59□□□□□ -1.19
MRPL42-205ENST00000549561 IRF7Q92985 503 aa7.59□□□□□ -1.19
MRPL42-205ENST00000549561 ARXQ96QS3 562 aa7.59□□□□□ -1.19
MRPL42-205ENST00000549561 TIMMDC1Q9NPL8 285 aa7.59□□□□□ -1.19
MRPL42-205ENST00000549561 STK17AQ9UEE5 414 aa7.59□□□□□ -1.19
MRPL42-205ENST00000549561 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
MRPL42-205ENST00000549561 SFI1A8K8P3 1242 aa7.58□□□□□ -1.2
MRPL42-205ENST00000549561 SEC13P55735 322 aa7.58□□□□□ -1.2
MRPL42-205ENST00000549561 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
MRPL42-205ENST00000549561 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
MRPL42-205ENST00000549561 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
MRPL42-205ENST00000549561 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
MRPL42-205ENST00000549561 PHKA2P46019 1235 aa7.57□□□□□ -1.2
MRPL42-205ENST00000549561 DPYDQ12882 1025 aa7.57□□□□□ -1.2
MRPL42-205ENST00000549561 TNS4Q8IZW8 715 aa7.57□□□□□ -1.2
MRPL42-205ENST00000549561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.56□□□□□ -1.2
MRPL42-205ENST00000549561 F11P03951 625 aa7.56□□□□□ -1.2
MRPL42-205ENST00000549561 ELOAQ14241 798 aaKnown RBP7.56□□□□□ -1.2
MRPL42-205ENST00000549561 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
MRPL42-205ENST00000549561 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
MRPL42-205ENST00000549561 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
MRPL42-205ENST00000549561 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 TEAD4Q15561 434 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 ZDHHC1Q8WTX9 485 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 PBXIP1Q96AQ6 731 aa7.55□□□□□ -1.2
MRPL42-205ENST00000549561 RBM19Q9Y4C8 960 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 489.5 ms