RNA–Protein interactions for RNA: ENST00000548058.5

ACSS3-203, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACSS3, Length 9,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-203ENST00000548058 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
ACSS3-203ENST00000548058 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
ACSS3-203ENST00000548058 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
ACSS3-203ENST00000548058 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
ACSS3-203ENST00000548058 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
ACSS3-203ENST00000548058 ERCC6LQ2NKX8 1250 aa13.39□□□□□ -0.27
ACSS3-203ENST00000548058 MGEA5O60502 916 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 CEP83Q9Y592 693 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 ZBTB24O43167 697 aaPredicted RBP13.38□□□□□ -0.27
ACSS3-203ENST00000548058 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
ACSS3-203ENST00000548058 TMEM266Q2M3C6 531 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
ACSS3-203ENST00000548058 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
ACSS3-203ENST00000548058 TXNDC16Q9P2K2 825 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 TTC14Q96N46 770 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 SERPINA10Q9UK55 444 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.27
ACSS3-203ENST00000548058 PSPC1Q8WXF1 523 aaKnown RBP13.37□□□□□ -0.27
ACSS3-203ENST00000548058 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 UBXN4Q92575 508 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
ACSS3-203ENST00000548058 CASQ1P31415 396 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 HSPA4P34932 840 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 MAP7Q14244 749 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
ACSS3-203ENST00000548058 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
ACSS3-203ENST00000548058 CEP120Q8N960 986 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 CCT6BQ92526 530 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 ALDH3A1P30838 453 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 SH2D4BQ5SQS7 431 aa13.36□□□□□ -0.27
ACSS3-203ENST00000548058 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
ACSS3-203ENST00000548058 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
ACSS3-203ENST00000548058 PFDN4Q9NQP4 134 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
ACSS3-203ENST00000548058 KRT85P78386 507 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 AIMP1Q12904 312 aaKnown RBP13.35□□□□□ -0.27
ACSS3-203ENST00000548058 TAF12Q16514 161 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 RASAL2Q9UJF2 1139 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 STIM2Q9P246 746 aa13.35□□□□□ -0.27
ACSS3-203ENST00000548058 DNAJC21Q5F1R6 531 aaKnown RBP13.34□□□□□ -0.27
ACSS3-203ENST00000548058 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 PRPHP41219 470 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
ACSS3-203ENST00000548058 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 CTNNA3Q9UI47 895 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 HAUS7Q99871 368 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
ACSS3-203ENST00000548058 ATP2A2P16615 1042 aaKnown RBP13.34□□□□□ -0.27
ACSS3-203ENST00000548058 CRCPO75575 148 aa13.33□□□□□ -0.27
ACSS3-203ENST00000548058 PRR16Q569H4 304 aa13.33□□□□□ -0.27
ACSS3-203ENST00000548058 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.27
ACSS3-203ENST00000548058 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 TDO2P48775 406 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.281e-8■■■□□ 17.7
ACSS3-203ENST00000548058 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 GIPC1O14908 333 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
ACSS3-203ENST00000548058 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 NUF2Q9BZD4 464 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 NUP155O75694 1391 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 USP5P45974 858 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 B4DLN1 442 aa13.32□□□□□ -0.28
ACSS3-203ENST00000548058 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
ACSS3-203ENST00000548058 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
ACSS3-203ENST00000548058 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 GSDMBQ8TAX9 411 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 CDC45O75419 566 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
ACSS3-203ENST00000548058 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 A0A087WZG4 1122 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 VCX3BQ9H321 246 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
ACSS3-203ENST00000548058 TACC3Q9Y6A5 838 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 CCDC30Q5VVM6 783 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
ACSS3-203ENST00000548058 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
ACSS3-203ENST00000548058 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
ACSS3-203ENST00000548058 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
ACSS3-203ENST00000548058 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms