RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 CEP131Q9UPN4 1083 aa20.3■□□□□ 0.84
ARHGEF28-214ENST00000545377 CCDC192P0DO97 292 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 MYO1BO43795 1136 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 MAP3K12Q12852 859 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 COMMD10Q9Y6G5 202 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 TAF4BQ92750 862 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 TAF3Q5VWG9 929 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
ARHGEF28-214ENST00000545377 ANKRD18BA2A2Z9 1011 aa20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 CBFA2T2O43439 604 aa20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 LARP1Q6PKG0 1096 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 CTCFLQ8NI51 663 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF28-214ENST00000545377 SAMM50Q9Y512 469 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 TRAK2O60296 914 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 CASTP20810 708 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 ST5P78524 1137 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 CETN2P41208 172 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 EXOC6BQ9Y2D4 811 aa20.27■□□□□ 0.84
ARHGEF28-214ENST00000545377 GRIN2BQ13224 1484 aa20.27■□□□□ 0.83
ARHGEF28-214ENST00000545377 CABP5Q9NP86 173 aa20.27■□□□□ 0.83
ARHGEF28-214ENST00000545377 NCOA2Q15596 1464 aa20.27■□□□□ 0.83
ARHGEF28-214ENST00000545377 KRT32Q14532 448 aa20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 FERMT2Q96AC1 680 aa20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 TSG101Q99816 390 aa20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 THUMPD2Q9BTF0 503 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
ARHGEF28-214ENST00000545377 MACROD2A1Z1Q3 448 aa20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 CTNNBL1Q8WYA6 563 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 DMRT2Q9Y5R5 561 aa20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 ZNF397Q8NF99 534 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-214ENST00000545377 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 PHF8Q9UPP1 1060 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 CFAP45Q9UL16 551 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 KLHL10Q6JEL2 608 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 CHD1LQ86WJ1 897 aa20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-214ENST00000545377 TNNT1P13805 278 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 TMEM266Q2M3C6 531 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 F8W031 263 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 NLRP5P59047 1200 aa20.23■□□□□ 0.83
ARHGEF28-214ENST00000545377 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 ATAD2Q6PL18 1390 aa20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 HMGN5P82970 282 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 SLC12A7Q9Y666 1083 aa20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-214ENST00000545377 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 SPTY2D1Q68D10 685 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 LEKR1Q6ZMV7 388 aa20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 CACNA2D4Q7Z3S7 1137 aa20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 ZSCAN31Q96LW9 406 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 SMARCA5O60264 1052 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 MPHOSPH6Q99547 160 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-214ENST00000545377 MRE11P49959 708 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 PUF60Q9UHX1 559 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 DNA2P51530 1060 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 CHRNA2Q15822 529 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 BAG4O95429 457 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
ARHGEF28-214ENST00000545377 ANKRD30BQ9BXX2 1392 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 ZNF213O14771 459 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 FCHSD2O94868 740 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 RAB34Q9BZG1 259 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 CCDC194A0A1B0GVG4 234 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 WDR63Q8IWG1 891 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 A0A087WZG4 1122 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 USP8P40818 1118 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 CAMK4Q16566 473 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 CDC5LQ99459 802 aaKnown RBP20.19■□□□□ 0.82
ARHGEF28-214ENST00000545377 K7ELQ4 463 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms