RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TDRD7Q8NHU6 1098 aaKnown RBP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 RMI1Q9H9A7 625 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 GPBP1L1Q9HC44 474 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 PDZRN3Q9UPQ7 1066 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 MAP4K4O95819 1239 aaPredicted RBP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 CBX1P83916 185 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 ADCY2Q08462 1091 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 PSMD2Q13200 908 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 DCTN1Q14203 1278 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 SOGA3Q5TF21 947 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 C16orf87Q6PH81 154 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 EFCAB13Q8IY85 973 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 VPS37AQ8NEZ2 397 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 SREK1Q8WXA9 508 aaKnown RBP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 CEP89Q96ST8 783 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 SH3GL3Q99963 347 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 GNL3LQ9NVN8 582 aaKnown RBP6.13□□□□□ -1.43
UBE4A-203ENST00000545354 JRKLQ9Y4A0 524 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 A0A1B0GUL7 405 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 IMPDH2P12268 514 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 VCAM1P19320 739 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 BDNFP23560 247 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 RDXP35241 583 aaKnown RBP6.12□□□□□ -1.43
UBE4A-203ENST00000545354 MAP2K2P36507 400 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 RPUSD2Q8IZ73 545 aaKnown RBP6.12□□□□□ -1.43
UBE4A-203ENST00000545354 ANKRD20A12PQ8NF67 263 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 MMTAG2Q9BU76 263 aaKnown RBP6.12□□□□□ -1.43
UBE4A-203ENST00000545354 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 IGSF5Q9NSI5 407 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 CPSF2Q9P2I0 782 aaKnown RBP6.12□□□□□ -1.43
UBE4A-203ENST00000545354 USP25Q9UHP3 1055 aa6.12□□□□□ -1.43
UBE4A-203ENST00000545354 FANCD2Q9BXW9 1451 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 SHTN1A0MZ66 631 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 KINO60870 393 aaKnown RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 TPPPO94811 219 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC159P0C7I6 412 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 FOSL1P15407 271 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 ATICP31939 592 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 USP8P40818 1118 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 NKX1-1Q15270 411 aaPredicted RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 TAF7Q15545 349 aaPredicted RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 TSNAXIP1Q2TAA8 658 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 C4orf46Q504U0 113 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 SUGP1Q8IWZ8 645 aaKnown RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC47Q96A33 483 aaKnown RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 FAM163AQ96GL9 167 aaPredicted RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 SCYL1Q96KG9 808 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 PUF60Q9UHX1 559 aaKnown RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 ATP2B1P20020 1258 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 NUCB2P80303 420 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
UBE4A-203ENST00000545354 MYRIPQ8NFW9 859 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 PMFBP1Q8TBY8 1022 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 FMNL2Q96PY5 1086 aa6.11□□□□□ -1.43
UBE4A-203ENST00000545354 TIMM44O43615 452 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 FOSBP53539 338 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 GYS2P54840 703 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 ICA1Q05084 483 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
UBE4A-203ENST00000545354 MFSD4BQ5TF39 518 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 UBE2Q1Q7Z7E8 422 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 MROH2BQ7Z745 1585 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 URB2Q14146 1524 aaKnown RBP6.1□□□□□ -1.43
UBE4A-203ENST00000545354 ZNF608Q9ULD9 1512 aaPredicted RBP6.1□□□□□ -1.43
UBE4A-203ENST00000545354 KANK1Q14678 1352 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 PPP1R37O75864 691 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 MAP9Q49MG5 647 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 TRIM74Q86UV6 250 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 TRIM73Q86UV7 250 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 RBM12BQ8IXT5 1001 aaKnown RBP6.1□□□□□ -1.43
UBE4A-203ENST00000545354 MYOCDQ8IZQ8 938 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 CDK5RAP3Q96JB5 506 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 PPP1R9BQ96SB3 815 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 IRAK4Q9NWZ3 460 aa6.1□□□□□ -1.43
UBE4A-203ENST00000545354 CTDP1Q9Y5B0 961 aaPredicted RBP6.1□□□□□ -1.43
UBE4A-203ENST00000545354 DHX29Q7Z478 1369 aaKnown RBP6.09□□□□□ -1.43
UBE4A-203ENST00000545354 CFAP69A5D8W1 941 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 SNPHO15079 494 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 SKILP12757 684 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 CCDC92Q53HC0 331 aaPredicted RBP6.09□□□□□ -1.43
UBE4A-203ENST00000545354 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 TMEM92Q6UXU6 159 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 C1orf131Q8NDD1 294 aaKnown RBP6.09□□□□□ -1.43
UBE4A-203ENST00000545354 HDAC7Q8WUI4 952 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 RSPH1Q8WYR4 309 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 UBXN4Q92575 508 aa6.09□□□□□ -1.43
UBE4A-203ENST00000545354 TNPO1Q92973 898 aaKnown RBP6.09□□□□□ -1.43
UBE4A-203ENST00000545354 RWDD1Q9H446 243 aaPredicted RBP6.09□□□□□ -1.43
UBE4A-203ENST00000545354 IFT122Q9HBG6 1241 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms