RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 MTFR1Q15390 333 aa10.57□□□□□ -0.72
COPA-206ENST00000545266 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
COPA-206ENST00000545266 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
COPA-206ENST00000545266 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
COPA-206ENST00000545266 RELBQ01201 579 aa10.56□□□□□ -0.72
COPA-206ENST00000545266 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
COPA-206ENST00000545266 CNKSR1Q969H4 720 aa10.56□□□□□ -0.72
COPA-206ENST00000545266 FHDC1Q9C0D6 1143 aaPredicted RBP10.56□□□□□ -0.72
COPA-206ENST00000545266 SLAIN2Q9P270 581 aa10.56□□□□□ -0.72
COPA-206ENST00000545266 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
COPA-206ENST00000545266 AXIN1O15169 862 aa10.55□□□□□ -0.72
COPA-206ENST00000545266 GPC1P35052 558 aa10.55□□□□□ -0.72
COPA-206ENST00000545266 FOXK2Q01167 660 aa10.55□□□□□ -0.72
COPA-206ENST00000545266 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
COPA-206ENST00000545266 RNF144AP50876 292 aaPredicted RBP10.54□□□□□ -0.72
COPA-206ENST00000545266 SMTNP53814 917 aa10.54□□□□□ -0.72
COPA-206ENST00000545266 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
COPA-206ENST00000545266 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
COPA-206ENST00000545266 CDK2AP1O14519 115 aa10.53□□□□□ -0.72
COPA-206ENST00000545266 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
COPA-206ENST00000545266 TSEN2Q8NCE0 465 aaKnown RBP10.53□□□□□ -0.72
COPA-206ENST00000545266 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
COPA-206ENST00000545266 SCHIP1Q9P0W5 487 aaPredicted RBP10.53□□□□□ -0.72
COPA-206ENST00000545266 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
COPA-206ENST00000545266 A6NJY4 79 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 UPP2O95045 317 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 WEE1P30291 646 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 CENPCQ03188 943 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 OCLNQ16625 522 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
COPA-206ENST00000545266 POTEAQ6S8J7 498 aa10.51□□□□□ -0.73
COPA-206ENST00000545266 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
COPA-206ENST00000545266 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
COPA-206ENST00000545266 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
COPA-206ENST00000545266 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
COPA-206ENST00000545266 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
COPA-206ENST00000545266 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
COPA-206ENST00000545266 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
COPA-206ENST00000545266 INSM2Q96T92 566 aaPredicted RBP10.5□□□□□ -0.73
COPA-206ENST00000545266 MEN1O00255 615 aa10.49□□□□□ -0.73
COPA-206ENST00000545266 C21orf2O43822 256 aa10.49□□□□□ -0.73
COPA-206ENST00000545266 SSFA2P28290 1259 aa10.49□□□□□ -0.73
COPA-206ENST00000545266 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
COPA-206ENST00000545266 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
COPA-206ENST00000545266 PHLDB3Q6NSJ2 640 aa10.49□□□□□ -0.73
COPA-206ENST00000545266 PPARGC1BQ86YN6 1023 aaKnown RBP10.49□□□□□ -0.73
COPA-206ENST00000545266 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
COPA-206ENST00000545266 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 BMP2P12643 396 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 BMP1P13497 986 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 IGFBP4P22692 258 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 SCARF1Q14162 830 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 TLR1Q15399 786 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 ATP13A2Q9NQ11 1180 aa10.48□□□□□ -0.73
COPA-206ENST00000545266 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
COPA-206ENST00000545266 BRD1O95696 1058 aa10.47□□□□□ -0.73
COPA-206ENST00000545266 HINFPQ9BQA5 517 aa10.47□□□□□ -0.73
COPA-206ENST00000545266 SPATA31C2B4DYI2 1134 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 LCE2BO14633 110 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 TAS1R3Q7RTX0 852 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 RNF217Q8TC41 542 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 PURBQ96QR8 312 aaKnown RBP10.46□□□□□ -0.73
COPA-206ENST00000545266 TSPAN10Q9H1Z9 355 aaPredicted RBP10.46□□□□□ -0.73
COPA-206ENST00000545266 CXXC1Q9P0U4 656 aaPredicted RBP10.46□□□□□ -0.73
COPA-206ENST00000545266 DACH1Q9UI36 760 aa10.46□□□□□ -0.73
COPA-206ENST00000545266 ATP2B4P23634 1241 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 WDR44Q5JSH3 913 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 SLC9A9Q8IVB4 645 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 NBPF15Q8N660 670 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
COPA-206ENST00000545266 USP3Q9Y6I4 520 aa10.45□□□□□ -0.74
COPA-206ENST00000545266 ATAD2Q6PL18 1390 aa10.44□□□□□ -0.74
COPA-206ENST00000545266 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
COPA-206ENST00000545266 TEAD4Q15561 434 aa10.44□□□□□ -0.74
COPA-206ENST00000545266 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
COPA-206ENST00000545266 POLMQ9NP87 494 aaPredicted RBP10.44□□□□□ -0.74
COPA-206ENST00000545266 TTLL8A6PVC2 850 aa10.43□□□□□ -0.74
COPA-206ENST00000545266 FOXO3O43524 673 aa10.43□□□□□ -0.74
COPA-206ENST00000545266 PRMT3O60678 531 aa10.43□□□□□ -0.74
COPA-206ENST00000545266 COL26A1Q96A83 441 aa10.43□□□□□ -0.74
COPA-206ENST00000545266 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
COPA-206ENST00000545266 PSMA6P60900 246 aaKnown RBP10.42□□□□□ -0.74
COPA-206ENST00000545266 RHBDD1Q8TEB9 315 aa10.42□□□□□ -0.74
COPA-206ENST00000545266 SCG3Q8WXD2 468 aaKnown RBP10.42□□□□□ -0.74
COPA-206ENST00000545266 C2orf49Q9BVC5 232 aaPredicted RBP10.42□□□□□ -0.74
COPA-206ENST00000545266 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
COPA-206ENST00000545266 NIFKQ9BYG3 293 aaKnown RBP10.41□□□□□ -0.74
COPA-206ENST00000545266 LGR5O75473 907 aa10.4□□□□□ -0.74
COPA-206ENST00000545266 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
COPA-206ENST00000545266 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
COPA-206ENST00000545266 LYSMD3Q7Z3D4 306 aa10.4□□□□□ -0.74
COPA-206ENST00000545266 ZDHHC1Q8WTX9 485 aa10.4□□□□□ -0.74
COPA-206ENST00000545266 EML1O00423 815 aa10.39□□□□□ -0.75
COPA-206ENST00000545266 KCNA1Q09470 495 aa10.39□□□□□ -0.75
COPA-206ENST00000545266 C4orf17Q53FE4 359 aa10.39□□□□□ -0.75
COPA-206ENST00000545266 TMEM214Q6NUQ4 689 aaKnown RBP10.39□□□□□ -0.75
COPA-206ENST00000545266 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
COPA-206ENST00000545266 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms