RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	SFI1	A8K8P3	1242 aa		10.14	□□□□□ -0.79
LEMD3-205	ENST00000544506	CNKSR1	Q969H4	720 aa		10.14	□□□□□ -0.79
LEMD3-205	ENST00000544506	XAGE2	Q96GT9	111 aa		10.14	□□□□□ -0.79
LEMD3-205	ENST00000544506	ZFP42	Q96MM3	310 aa		10.14	□□□□□ -0.79
LEMD3-205	ENST00000544506	CTSO	P43234	321 aa	Predicted RBP	10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	STK32A	Q8WU08	396 aa		10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	ESYT1	Q9BSJ8	1104 aa		10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	POLM	Q9NP87	494 aa	Predicted RBP	10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	SERTAD1	Q9UHV2	236 aa		10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	RBM19	Q9Y4C8	960 aa	Known RBP	10.13	□□□□□ -0.79
LEMD3-205	ENST00000544506	ACIN1	Q9UKV3	1341 aa	Known RBP	10.12	□□□□□ -0.79
LEMD3-205	ENST00000544506	SEC13	P55735	322 aa		10.12	□□□□□ -0.79
LEMD3-205	ENST00000544506	FAM200A	Q8TCP9	573 aa		10.12	□□□□□ -0.79
LEMD3-205	ENST00000544506	NLRP3	Q96P20	1036 aa		10.12	□□□□□ -0.79
LEMD3-205	ENST00000544506	HRH3	Q9Y5N1	445 aa		10.12	□□□□□ -0.79
LEMD3-205	ENST00000544506	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.11	□□□□□ -0.79
LEMD3-205	ENST00000544506	BACH1	O14867	736 aa		10.1	□□□□□ -0.79
LEMD3-205	ENST00000544506	TLR1	Q15399	786 aa		10.1	□□□□□ -0.79
LEMD3-205	ENST00000544506	TMEM164	Q5U3C3	297 aa		10.1	□□□□□ -0.79
LEMD3-205	ENST00000544506	SOS2	Q07890	1332 aa	Predicted RBP	10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506		M0R2N6	131 aa		10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	CENPC	Q03188	943 aa		10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	TSEN2	Q8NCE0	465 aa	Known RBP	10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	RNF217	Q8TC41	542 aa		10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	SLC4A9	Q96Q91	983 aa		10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	GMPR2	Q9P2T1	348 aa	Known RBP	10.09	□□□□□ -0.79
LEMD3-205	ENST00000544506	TTLL8	A6PVC2	850 aa		10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	CSB-PGBD3	P0DP91	1061 aa		10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	GPC1	P35052	558 aa		10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	RNF144A	P50876	292 aa	Predicted RBP	10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	SMTN	P53814	917 aa		10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	RETREG2	Q8NC44	543 aa		10.08	□□□□□ -0.8
LEMD3-205	ENST00000544506	EPHA4	P54764	986 aa		10.07	□□□□□ -0.8
LEMD3-205	ENST00000544506	TNS4	Q8IZW8	715 aa		10.07	□□□□□ -0.8
LEMD3-205	ENST00000544506		A6NJY4	79 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	FAM69C	Q0P6D2	419 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	MTFR1	Q15390	333 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	SLC27A3	Q5K4L6	730 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	GRIP2	Q9C0E4	1043 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	SENP2	Q9HC62	589 aa		10.06	□□□□□ -0.8
LEMD3-205	ENST00000544506	TMEM88B	A6NKF7	163 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	FIGNL2	A6NMB9	653 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	LGR5	O75473	907 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	TRIM47	Q96LD4	638 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	DNMT3L	Q9UJW3	386 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	USP3	Q9Y6I4	520 aa		10.05	□□□□□ -0.8
LEMD3-205	ENST00000544506	CARNS1	A5YM72	827 aa		10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	SWI5	Q1ZZU3	235 aa		10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	KIFC2	Q96AC6	838 aa		10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	HINFP	Q9BQA5	517 aa		10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	UST	Q9Y2C2	406 aa		10.04	□□□□□ -0.8
LEMD3-205	ENST00000544506	SOBP	A7XYQ1	873 aa		10.03	□□□□□ -0.8
LEMD3-205	ENST00000544506	FOXK2	Q01167	660 aa		10.03	□□□□□ -0.8
LEMD3-205	ENST00000544506	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.03	□□□□□ -0.8
LEMD3-205	ENST00000544506	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.03	□□□□□ -0.8
LEMD3-205	ENST00000544506	TBCEL	Q5QJ74	424 aa		10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	TMEM214	Q6NUQ4	689 aa	Known RBP	10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	LYSMD3	Q7Z3D4	306 aa		10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	PRICKLE2	Q7Z3G6	844 aa		10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	SLC9A9	Q8IVB4	645 aa		10.02	□□□□□ -0.81
LEMD3-205	ENST00000544506	POTEC	B2RU33	542 aa		10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	CDK2AP1	O14519	115 aa		10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	MAN1A2	O60476	641 aa		10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	SNRPB	P14678	240 aa	Known RBP	10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	GTF2E1	P29083	439 aa	Predicted RBP	10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	NBPF15	Q8N660	670 aa		10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	SLAIN2	Q9P270	581 aa		10.01	□□□□□ -0.81
LEMD3-205	ENST00000544506	SPATA31C2	B4DYI2	1134 aa		10	□□□□□ -0.81
LEMD3-205	ENST00000544506	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10	□□□□□ -0.81
LEMD3-205	ENST00000544506	ZNF295-AS1	Q8N0V1	137 aa		10	□□□□□ -0.81
LEMD3-205	ENST00000544506	RHBDD1	Q8TEB9	315 aa		10	□□□□□ -0.81
LEMD3-205	ENST00000544506	CLP1	Q92989	425 aa	Known RBP	10	□□□□□ -0.81
LEMD3-205	ENST00000544506	C11orf95	C9JLR9	678 aa	Predicted RBP	9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	PRMT3	O60678	531 aa		9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	RHOQ	P17081	205 aa		9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	POU4F2	Q12837	409 aa		9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	C4orf17	Q53FE4	359 aa		9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	GNAS	Q5JWF2	1037 aa		9.99	□□□□□ -0.81
LEMD3-205	ENST00000544506	C21orf2	O43822	256 aa		9.98	□□□□□ -0.81
LEMD3-205	ENST00000544506	NBPF10	Q6P3W6	841 aa	Known RBP	9.98	□□□□□ -0.81
LEMD3-205	ENST00000544506	TAS1R3	Q7RTX0	852 aa		9.98	□□□□□ -0.81
LEMD3-205	ENST00000544506	SCG3	Q8WXD2	468 aa	Known RBP	9.98	□□□□□ -0.81
LEMD3-205	ENST00000544506	PRIMPOL	Q96LW4	560 aa		9.98	□□□□□ -0.81
LEMD3-205	ENST00000544506	WEE1	P30291	646 aa		9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	OCLN	Q16625	522 aa		9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	GAS2L2	Q8NHY3	880 aa		9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	NIFK	Q9BYG3	293 aa	Known RBP	9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	CABP1	Q9NZU7	370 aa		9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	ATAD2	Q6PL18	1390 aa		9.97	□□□□□ -0.81
LEMD3-205	ENST00000544506	PPP1R12B	O60237	982 aa	Predicted RBP	9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	IGFBP4	P22692	258 aa		9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	PHKA2	P46019	1235 aa		9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	PLA2G4A	P47712	749 aa		9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	PSMA6	P60900	246 aa	Known RBP	9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	ZDHHC1	Q8WTX9	485 aa		9.96	□□□□□ -0.82
LEMD3-205	ENST00000544506	TEAD4	Q15561	434 aa		9.95	□□□□□ -0.82

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