RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 LINC00116Q8NCU8 138 aa25.53■■□□□ 1.68
LTBR-211ENST00000543190 SCN11AQ9UI33 1791 aa25.53■■□□□ 1.68
LTBR-211ENST00000543190 KIF13BQ9NQT8 1826 aa25.52■■□□□ 1.68
LTBR-211ENST00000543190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.52■■□□□ 1.68
LTBR-211ENST00000543190 MSH5O43196 834 aa25.52■■□□□ 1.68
LTBR-211ENST00000543190 GRIN3BO60391 1043 aa25.52■■□□□ 1.68
LTBR-211ENST00000543190 KDM6AO15550 1401 aaPredicted RBP25.52■■□□□ 1.68
LTBR-211ENST00000543190 ITPK1Q13572 414 aa25.51■■□□□ 1.67
LTBR-211ENST00000543190 MYH14Q7Z406 1995 aaKnown RBP25.51■■□□□ 1.67
LTBR-211ENST00000543190 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
LTBR-211ENST00000543190 ATP6V1AP38606 617 aa25.49■■□□□ 1.67
LTBR-211ENST00000543190 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
LTBR-211ENST00000543190 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
LTBR-211ENST00000543190 IL13P35225 146 aa25.48■■□□□ 1.67
LTBR-211ENST00000543190 MSL1Q68DK7 614 aa25.48■■□□□ 1.67
LTBR-211ENST00000543190 VIRMAQ69YN4 1812 aaKnown RBP25.47■■□□□ 1.67
LTBR-211ENST00000543190 KLHL34Q8N239 644 aa25.47■■□□□ 1.67
LTBR-211ENST00000543190 NPC1L1Q9UHC9 1359 aa25.46■■□□□ 1.67
LTBR-211ENST00000543190 YBX3P16989 372 aaKnown RBP eCLIP25.46■■□□□ 1.676e-11■■□□□ 12.3
LTBR-211ENST00000543190 ADRA2BP18089 450 aa25.46■■□□□ 1.67
LTBR-211ENST00000543190 SLC4A9Q96Q91 983 aa25.46■■□□□ 1.67
LTBR-211ENST00000543190 CNTNAP4Q9C0A0 1308 aa25.45■■□□□ 1.66
LTBR-211ENST00000543190 ZNF530Q6P9A1 599 aaPredicted RBP25.45■■□□□ 1.66
LTBR-211ENST00000543190 ADAMTS7Q9UKP4 1686 aa25.45■■□□□ 1.66
LTBR-211ENST00000543190 AEBP1Q8IUX7 1158 aa25.44■■□□□ 1.66
LTBR-211ENST00000543190 GNPATO15228 680 aa25.43■■□□□ 1.66
LTBR-211ENST00000543190 C4AP0C0L4 1744 aa25.43■■□□□ 1.66
LTBR-211ENST00000543190 KIAA1551Q9HCM1 1747 aa25.41■■□□□ 1.66
LTBR-211ENST00000543190 MTHFSP49914 203 aa25.41■■□□□ 1.66
LTBR-211ENST00000543190 SULT6B1Q6IMI4 303 aa25.41■■□□□ 1.66
LTBR-211ENST00000543190 MRC1P22897 1456 aa25.4■■□□□ 1.66
LTBR-211ENST00000543190 PHF14O94880 888 aa25.4■■□□□ 1.66
LTBR-211ENST00000543190 CABP4P57796 275 aa25.4■■□□□ 1.66
LTBR-211ENST00000543190 C1orf141Q5JVX7 400 aa25.4■■□□□ 1.66
LTBR-211ENST00000543190 RTCBQ9Y3I0 505 aaKnown RBP25.4■■□□□ 1.66
LTBR-211ENST00000543190 TJP1Q07157 1748 aa25.4■■□□□ 1.66
LTBR-211ENST00000543190 RPS6KA4O75676 772 aa25.38■■□□□ 1.65
LTBR-211ENST00000543190 NLGN1Q8N2Q7 840 aa25.38■■□□□ 1.65
LTBR-211ENST00000543190 TRAPPC3LQ5T215 181 aa25.37■■□□□ 1.65
LTBR-211ENST00000543190 BRCA1P38398 1863 aaKnown RBP25.36■■□□□ 1.65
LTBR-211ENST00000543190 AKAP4Q5JQC9 854 aa25.36■■□□□ 1.65
LTBR-211ENST00000543190 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
LTBR-211ENST00000543190 ADCY9O60503 1353 aa25.35■■□□□ 1.65
LTBR-211ENST00000543190 SMIM5Q71RC9 77 aa25.35■■□□□ 1.65
LTBR-211ENST00000543190 NFATC2IPQ8NCF5 419 aa25.35■■□□□ 1.65
LTBR-211ENST00000543190 C1QTNF8P60827 252 aa25.34■■□□□ 1.65
LTBR-211ENST00000543190 RBM42Q9BTD8 480 aaKnown RBP25.34■■□□□ 1.65
LTBR-211ENST00000543190 C10orf71Q711Q0 1435 aa25.33■■□□□ 1.65
LTBR-211ENST00000543190 ARHGEF1Q92888 912 aaKnown RBP25.33■■□□□ 1.65
LTBR-211ENST00000543190 COL3A1P02461 1466 aaPredicted RBP25.33■■□□□ 1.65
LTBR-211ENST00000543190 UBR2Q8IWV8 1755 aa25.32■■□□□ 1.64
LTBR-211ENST00000543190 MMP10P09238 476 aa25.32■■□□□ 1.64
LTBR-211ENST00000543190 GYS1P13807 737 aa25.31■■□□□ 1.64
LTBR-211ENST00000543190 TGFB2P61812 414 aa25.31■■□□□ 1.64
LTBR-211ENST00000543190 SLC52A2Q9HAB3 445 aa25.31■■□□□ 1.64
LTBR-211ENST00000543190 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
LTBR-211ENST00000543190 N4BP2Q86UW6 1770 aaPredicted RBP25.29■■□□□ 1.64
LTBR-211ENST00000543190 ARFGEF1Q9Y6D6 1849 aa25.28■■□□□ 1.64
LTBR-211ENST00000543190 DIAPH1O60610 1272 aaKnown RBP25.28■■□□□ 1.64
LTBR-211ENST00000543190 RFC4P35249 363 aa25.28■■□□□ 1.64
LTBR-211ENST00000543190 CRKLP46109 303 aaKnown RBP25.28■■□□□ 1.64
LTBR-211ENST00000543190 PTCD1O75127 700 aaKnown RBP25.27■■□□□ 1.64
LTBR-211ENST00000543190 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
LTBR-211ENST00000543190 GIGYF1O75420 1035 aaPredicted RBP25.26■■□□□ 1.63
LTBR-211ENST00000543190 SIPA1L3O60292 1781 aaPredicted RBP25.26■■□□□ 1.63
LTBR-211ENST00000543190 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
LTBR-211ENST00000543190 USP42Q9H9J4 1324 aaKnown RBP25.25■■□□□ 1.63
LTBR-211ENST00000543190 ATP10DQ9P241 1426 aa25.25■■□□□ 1.63
LTBR-211ENST00000543190 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
LTBR-211ENST00000543190 VSIG10Q8N0Z9 540 aa25.24■■□□□ 1.63
LTBR-211ENST00000543190 LGR6Q9HBX8 967 aa25.23■■□□□ 1.63
LTBR-211ENST00000543190 CCDC87Q9NVE4 849 aa25.23■■□□□ 1.63
LTBR-211ENST00000543190 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
LTBR-211ENST00000543190 CC2D1BQ5T0F9 858 aaKnown RBP25.22■■□□□ 1.63
LTBR-211ENST00000543190 CEP350Q5VT06 3117 aa25.21■■□□□ 1.63
LTBR-211ENST00000543190 HMOX1P09601 288 aa25.21■■□□□ 1.63
LTBR-211ENST00000543190 NRXN2Q9P2S2 1712 aa25.2■■□□□ 1.63
LTBR-211ENST00000543190 PARP3Q9Y6F1 533 aa25.2■■□□□ 1.62
LTBR-211ENST00000543190 CYP19A1P11511 503 aaPredicted RBP25.19■■□□□ 1.62
LTBR-211ENST00000543190 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
LTBR-211ENST00000543190 AFDNP55196 1824 aaKnown RBP25.17■■□□□ 1.62
LTBR-211ENST00000543190 TM4SF1P30408 202 aa25.17■■□□□ 1.62
LTBR-211ENST00000543190 KCNA3P22001 575 aa25.16■■□□□ 1.62
LTBR-211ENST00000543190 DNAJC10Q8IXB1 793 aa25.16■■□□□ 1.62
LTBR-211ENST00000543190 FKBP8Q14318 412 aa25.15■■□□□ 1.62
LTBR-211ENST00000543190 GAS2L2Q8NHY3 880 aa25.15■■□□□ 1.62
LTBR-211ENST00000543190 CEMIPQ8WUJ3 1361 aa25.15■■□□□ 1.62
LTBR-211ENST00000543190 GPBP1L1Q9HC44 474 aaPredicted RBP25.14■■□□□ 1.62
LTBR-211ENST00000543190 DLEC1Q9Y238 1755 aa25.13■■□□□ 1.61
LTBR-211ENST00000543190 A0A0G2JLW4 131 aa25.13■■□□□ 1.61
LTBR-211ENST00000543190 DDR1Q08345 913 aa25.13■■□□□ 1.61
LTBR-211ENST00000543190 SRP68Q9UHB9 627 aaKnown RBP25.13■■□□□ 1.61
LTBR-211ENST00000543190 NARFQ9UHQ1 456 aa25.13■■□□□ 1.61
LTBR-211ENST00000543190 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
LTBR-211ENST00000543190 GNAT3A8MTJ3 354 aa25.12■■□□□ 1.61
LTBR-211ENST00000543190 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
LTBR-211ENST00000543190 DPEP1P16444 411 aa25.12■■□□□ 1.61
LTBR-211ENST00000543190 SLC39A6Q13433 755 aa25.12■■□□□ 1.61
LTBR-211ENST00000543190 COL15A1P39059 1388 aa25.12■■□□□ 1.61
LTBR-211ENST00000543190 SBF1O95248 1867 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms