RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CCDC57Q2TAC2 916 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 MPHOSPH8Q99549 860 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 SOS1Q07889 1333 aaPredicted RBP9.6□□□□□ -0.87
LRP6-206ENST00000543091 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 CNNM1Q9NRU3 951 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 STK32BQ9NY57 414 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 RTCBQ9Y3I0 505 aaKnown RBP9.6□□□□□ -0.87
LRP6-206ENST00000543091 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 ERC1Q8IUD2 1116 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
LRP6-206ENST00000543091 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
LRP6-206ENST00000543091 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
LRP6-206ENST00000543091 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
LRP6-206ENST00000543091 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 CLASRPQ8N2M8 674 aaKnown RBP9.59□□□□□ -0.87
LRP6-206ENST00000543091 PTPRCP08575 1304 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
LRP6-206ENST00000543091 PHF14O94880 888 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 NEUROD6Q96NK8 337 aa9.59□□□□□ -0.87
LRP6-206ENST00000543091 BCAR3O75815 825 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 TRMT112Q9UI30 125 aaKnown RBP9.58□□□□□ -0.88
LRP6-206ENST00000543091 PPLO60437 1756 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 ERC2O15083 957 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 IGHMBP2P38935 993 aaKnown RBP9.58□□□□□ -0.88
LRP6-206ENST00000543091 RBM6P78332 1123 aaKnown RBP9.58□□□□□ -0.88
LRP6-206ENST00000543091 FLIIQ13045 1269 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 KRT27Q7Z3Y8 459 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 SSH1Q8WYL5 1049 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 MYD88Q99836 296 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 SLC52A2Q9HAB3 445 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 APBA3O96018 575 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 ANP32EQ9BTT0 268 aa9.58□□□□□ -0.88
LRP6-206ENST00000543091 SOS2Q07890 1332 aaPredicted RBP9.58□□□□□ -0.88
LRP6-206ENST00000543091 GNL3LQ9NVN8 582 aaKnown RBP9.58□□□□□ -0.88
LRP6-206ENST00000543091 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 POLD1P28340 1107 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 PHKG2P15735 406 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 RARSP54136 660 aaKnown RBP9.57□□□□□ -0.88
LRP6-206ENST00000543091 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
LRP6-206ENST00000543091 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 ISY1Q9ULR0 285 aaKnown RBP9.57□□□□□ -0.88
LRP6-206ENST00000543091 IQGAP1P46940 1657 aa9.57□□□□□ -0.88
LRP6-206ENST00000543091 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 MED14O60244 1454 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 HOXB7P09629 217 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 NAP1L2Q9ULW6 460 aaPredicted RBP9.56□□□□□ -0.88
LRP6-206ENST00000543091 ADGRB1O14514 1584 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 CDK12Q9NYV4 1490 aaPredicted RBP9.56□□□□□ -0.88
LRP6-206ENST00000543091 ST5P78524 1137 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 MVPQ14764 893 aaKnown RBP9.56□□□□□ -0.88
LRP6-206ENST00000543091 RUFY2Q8WXA3 655 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
LRP6-206ENST00000543091 SETDB2Q96T68 719 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 CWC25Q9NXE8 425 aaPredicted RBP9.56□□□□□ -0.88
LRP6-206ENST00000543091 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
LRP6-206ENST00000543091 CPSF1Q10570 1443 aaKnown RBP9.55□□□□□ -0.88
LRP6-206ENST00000543091 CEP126Q9P2H0 1117 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 GPTP24298 496 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 NBPF5PQ86XG9 351 aaPredicted RBP9.55□□□□□ -0.88
LRP6-206ENST00000543091 GNPATO15228 680 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 RILPL2Q969X0 211 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 DIAPH3Q9NSV4 1193 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 MST1RQ04912 1400 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
LRP6-206ENST00000543091 RPAP2Q8IXW5 612 aaPredicted RBP9.55□□□□□ -0.88
LRP6-206ENST00000543091 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
LRP6-206ENST00000543091 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 COPS6Q7L5N1 327 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 SRGAP3O43295 1099 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 FLAD1Q8NFF5 587 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 MAP3K2Q9Y2U5 619 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 PI4KAP2A4QPH2 592 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 NYXQ9GZU5 481 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 LGR6Q9HBX8 967 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
LRP6-206ENST00000543091 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
LRP6-206ENST00000543091 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 FBXO41Q8TF61 875 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 IFIT5Q13325 482 aaKnown RBP9.53□□□□□ -0.88
LRP6-206ENST00000543091 CDC5LQ99459 802 aaKnown RBP9.53□□□□□ -0.88
LRP6-206ENST00000543091 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRP6-206ENST00000543091 TBC1D2BQ9UPU7 963 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 ARHGAP45Q92619 1136 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
LRP6-206ENST00000543091 VPS72Q15906 364 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms