RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 C1QTNF8P60827 252 aa20.41■□□□□ 0.86
ITM2C-208ENST00000541852 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
ITM2C-208ENST00000541852 PHF14O94880 888 aa20.4■□□□□ 0.86
ITM2C-208ENST00000541852 GNPATO15228 680 aa20.39■□□□□ 0.85
ITM2C-208ENST00000541852 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■□□□□ 8.8
ITM2C-208ENST00000541852 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
ITM2C-208ENST00000541852 ITPK1Q13572 414 aa20.38■□□□□ 0.85
ITM2C-208ENST00000541852 TRAPPC3LQ5T215 181 aa20.38■□□□□ 0.85
ITM2C-208ENST00000541852 RTCBQ9Y3I0 505 aaKnown RBP20.38■□□□□ 0.85
ITM2C-208ENST00000541852 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 GIGYF1O75420 1035 aaPredicted RBP20.37■□□□□ 0.85
ITM2C-208ENST00000541852 ADRA2BP18089 450 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 MTHFSP49914 203 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 CABP4P57796 275 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 C1orf141Q5JVX7 400 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 ZNF530Q6P9A1 599 aaPredicted RBP20.37■□□□□ 0.85
ITM2C-208ENST00000541852 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
ITM2C-208ENST00000541852 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
ITM2C-208ENST00000541852 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
ITM2C-208ENST00000541852 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.85
ITM2C-208ENST00000541852 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
ITM2C-208ENST00000541852 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
ITM2C-208ENST00000541852 CNTNAP4Q9C0A0 1308 aa20.31■□□□□ 0.84
ITM2C-208ENST00000541852 IL13P35225 146 aa20.31■□□□□ 0.84
ITM2C-208ENST00000541852 RFC4P35249 363 aa20.31■□□□□ 0.84
ITM2C-208ENST00000541852 TGFB2P61812 414 aa20.31■□□□□ 0.84
ITM2C-208ENST00000541852 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
ITM2C-208ENST00000541852 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
ITM2C-208ENST00000541852 MMP10P09238 476 aa20.3■□□□□ 0.84
ITM2C-208ENST00000541852 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
ITM2C-208ENST00000541852 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
ITM2C-208ENST00000541852 KDRP35968 1356 aa20.3■□□□□ 0.84
ITM2C-208ENST00000541852 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
ITM2C-208ENST00000541852 SLC4A9Q96Q91 983 aa20.29■□□□□ 0.84
ITM2C-208ENST00000541852 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
ITM2C-208ENST00000541852 AEBP1Q8IUX7 1158 aa20.28■□□□□ 0.84
ITM2C-208ENST00000541852 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
ITM2C-208ENST00000541852 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
ITM2C-208ENST00000541852 GPBP1L1Q9HC44 474 aaPredicted RBP20.26■□□□□ 0.83
ITM2C-208ENST00000541852 PARP3Q9Y6F1 533 aa20.26■□□□□ 0.83
ITM2C-208ENST00000541852 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
ITM2C-208ENST00000541852 GYS1P13807 737 aa20.24■□□□□ 0.83
ITM2C-208ENST00000541852 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
ITM2C-208ENST00000541852 ATP10DQ9P241 1426 aa20.22■□□□□ 0.83
ITM2C-208ENST00000541852 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
ITM2C-208ENST00000541852 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
ITM2C-208ENST00000541852 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
ITM2C-208ENST00000541852 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
ITM2C-208ENST00000541852 ADCY9O60503 1353 aa20.19■□□□□ 0.82
ITM2C-208ENST00000541852 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
ITM2C-208ENST00000541852 A0A0G2JLW4 131 aa20.18■□□□□ 0.82
ITM2C-208ENST00000541852 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
ITM2C-208ENST00000541852 BCS1LQ9Y276 419 aa20.18■□□□□ 0.82
ITM2C-208ENST00000541852 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
ITM2C-208ENST00000541852 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
ITM2C-208ENST00000541852 ZPR1O75312 459 aa20.17■□□□□ 0.82
ITM2C-208ENST00000541852 VSIG10Q8N0Z9 540 aa20.17■□□□□ 0.82
ITM2C-208ENST00000541852 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
ITM2C-208ENST00000541852 SCN11AQ9UI33 1791 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 HMOX1P09601 288 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 INTS5Q6P9B9 1019 aaKnown RBP20.16■□□□□ 0.82
ITM2C-208ENST00000541852 PIM2Q9P1W9 311 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
ITM2C-208ENST00000541852 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 PXDNLA1KZ92 1463 aa20.16■□□□□ 0.82
ITM2C-208ENST00000541852 FCHSD2O94868 740 aa20.15■□□□□ 0.82
ITM2C-208ENST00000541852 DPEP1P16444 411 aa20.15■□□□□ 0.82
ITM2C-208ENST00000541852 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
ITM2C-208ENST00000541852 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
ITM2C-208ENST00000541852 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
ITM2C-208ENST00000541852 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
ITM2C-208ENST00000541852 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
ITM2C-208ENST00000541852 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
ITM2C-208ENST00000541852 TM4SF1P30408 202 aa20.13■□□□□ 0.81
ITM2C-208ENST00000541852 FKBP8Q14318 412 aa20.13■□□□□ 0.81
ITM2C-208ENST00000541852 DNAJC10Q8IXB1 793 aa20.13■□□□□ 0.81
ITM2C-208ENST00000541852 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
ITM2C-208ENST00000541852 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
ITM2C-208ENST00000541852 STARD3NLO95772 234 aa20.11■□□□□ 0.81
ITM2C-208ENST00000541852 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
ITM2C-208ENST00000541852 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
ITM2C-208ENST00000541852 TEX13AQ9BXU3 409 aaPredicted RBP20.11■□□□□ 0.81
ITM2C-208ENST00000541852 SOS1Q07889 1333 aaPredicted RBP20.1■□□□□ 0.81
ITM2C-208ENST00000541852 KCNA3P22001 575 aa20.1■□□□□ 0.81
ITM2C-208ENST00000541852 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
ITM2C-208ENST00000541852 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
ITM2C-208ENST00000541852 NARFQ9UHQ1 456 aa20.1■□□□□ 0.81
ITM2C-208ENST00000541852 N4BP2Q86UW6 1770 aaPredicted RBP20.09■□□□□ 0.81
ITM2C-208ENST00000541852 HSPA6P17066 643 aa20.09■□□□□ 0.81
ITM2C-208ENST00000541852 CEP350Q5VT06 3117 aa20.09■□□□□ 0.81
ITM2C-208ENST00000541852 MRC1P22897 1456 aa20.08■□□□□ 0.81
ITM2C-208ENST00000541852 A0A087WZG4 1122 aa20.08■□□□□ 0.81
ITM2C-208ENST00000541852 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
ITM2C-208ENST00000541852 POLRMTO00411 1230 aaKnown RBP20.08■□□□□ 0.81
ITM2C-208ENST00000541852 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
ITM2C-208ENST00000541852 TEFQ10587 303 aa20.08■□□□□ 0.81
ITM2C-208ENST00000541852 USPL1Q5W0Q7 1092 aa20.08■□□□□ 0.81
ITM2C-208ENST00000541852 DDR1Q08345 913 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms