RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 DAXXQ9UER7 740 aaPredicted RBP19.32■□□□□ 0.68
CLPTM1-202ENST00000541297 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
CLPTM1-202ENST00000541297 IGHDP01880 384 aa19.31■□□□□ 0.68
CLPTM1-202ENST00000541297 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
CLPTM1-202ENST00000541297 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
CLPTM1-202ENST00000541297 KDM3BQ7LBC6 1761 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 KCNQ3O43525 872 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 EVA1CP58658 441 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 PCDHB15Q9Y5E8 787 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
CLPTM1-202ENST00000541297 ARHGAP45Q92619 1136 aa19.29■□□□□ 0.68
CLPTM1-202ENST00000541297 BABAM1Q9NWV8 329 aa19.28■□□□□ 0.68
CLPTM1-202ENST00000541297 PHKG2P15735 406 aa19.28■□□□□ 0.68
CLPTM1-202ENST00000541297 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
CLPTM1-202ENST00000541297 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.68
CLPTM1-202ENST00000541297 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
CLPTM1-202ENST00000541297 PKD1L3Q7Z443 1732 aa19.27■□□□□ 0.68
CLPTM1-202ENST00000541297 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
CLPTM1-202ENST00000541297 CYP27B1O15528 508 aa19.26■□□□□ 0.67
CLPTM1-202ENST00000541297 TOM1O60784 492 aa19.26■□□□□ 0.67
CLPTM1-202ENST00000541297 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
CLPTM1-202ENST00000541297 ABCC4O15439 1325 aa19.26■□□□□ 0.67
CLPTM1-202ENST00000541297 PARP4Q9UKK3 1724 aaKnown RBP19.26■□□□□ 0.67
CLPTM1-202ENST00000541297 RGS3P49796 1198 aa19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 G2E3Q7L622 706 aa19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 ADAMTS7Q9UKP4 1686 aa19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 EIF4A1P60842 406 aaKnown RBP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 AAMPQ13685 434 aa19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 COL16A1Q07092 1604 aaPredicted RBP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 COL22A1Q8NFW1 1626 aaPredicted RBP19.25■□□□□ 0.67
CLPTM1-202ENST00000541297 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
CLPTM1-202ENST00000541297 OVOS2A0A0G2JMS6 1433 aa19.24■□□□□ 0.67
CLPTM1-202ENST00000541297 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
CLPTM1-202ENST00000541297 CCDC30Q5VVM6 783 aa19.24■□□□□ 0.67
CLPTM1-202ENST00000541297 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
CLPTM1-202ENST00000541297 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
CLPTM1-202ENST00000541297 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
CLPTM1-202ENST00000541297 RGS12O14924 1447 aa19.22■□□□□ 0.67
CLPTM1-202ENST00000541297 ADAMTS2O95450 1211 aa19.22■□□□□ 0.67
CLPTM1-202ENST00000541297 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
CLPTM1-202ENST00000541297 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
CLPTM1-202ENST00000541297 COL14A1Q05707 1796 aaKnown RBP19.22■□□□□ 0.67
CLPTM1-202ENST00000541297 FRAT2O75474 233 aaPredicted RBP19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 IL2RBP14784 551 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 CACNA1FO60840 1977 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 PTPRCP08575 1304 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 ZCRB1Q8TBF4 217 aaKnown RBP19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 C1orf115Q9H7X2 142 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 SLC52A2Q9HAB3 445 aa19.21■□□□□ 0.67
CLPTM1-202ENST00000541297 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-202ENST00000541297 NUTM2BA6NNL0 878 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-202ENST00000541297 NUTM2EB1AL46 878 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-202ENST00000541297 F6X3S4 739 aa19.2■□□□□ 0.66
CLPTM1-202ENST00000541297 NUTM2AQ8IVF1 878 aaPredicted RBP19.2■□□□□ 0.66
CLPTM1-202ENST00000541297 DCAF5Q96JK2 942 aa19.19■□□□□ 0.66
CLPTM1-202ENST00000541297 PRAMEF22A3QJZ6 481 aa19.19■□□□□ 0.66
CLPTM1-202ENST00000541297 DDX54Q8TDD1 881 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-202ENST00000541297 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 FLIIQ13045 1269 aa19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
CLPTM1-202ENST00000541297 FKBP5Q13451 457 aaPredicted RBP19.17■□□□□ 0.66
CLPTM1-202ENST00000541297 PLEKHG2Q9H7P9 1386 aa19.17■□□□□ 0.66
CLPTM1-202ENST00000541297 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 CHPF2Q9P2E5 772 aa19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 ANXA1P04083 346 aa19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 INTS3Q68E01 1043 aaKnown RBP19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 ZNF790Q6PG37 636 aa19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
CLPTM1-202ENST00000541297 GIGYF1O75420 1035 aaPredicted RBP19.15■□□□□ 0.66
CLPTM1-202ENST00000541297 CABP4P57796 275 aa19.15■□□□□ 0.66
CLPTM1-202ENST00000541297 HOXB7P09629 217 aa19.14■□□□□ 0.65
CLPTM1-202ENST00000541297 UBE2Q2Q8WVN8 375 aa19.14■□□□□ 0.65
CLPTM1-202ENST00000541297 MRC1P22897 1456 aa19.13■□□□□ 0.65
CLPTM1-202ENST00000541297 C5P01031 1676 aa19.13■□□□□ 0.65
CLPTM1-202ENST00000541297 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
CLPTM1-202ENST00000541297 HEG1Q9ULI3 1381 aa19.12■□□□□ 0.65
CLPTM1-202ENST00000541297 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
CLPTM1-202ENST00000541297 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
CLPTM1-202ENST00000541297 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
CLPTM1-202ENST00000541297 ZNF496Q96IT1 587 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-202ENST00000541297 MEIS3Q99687 375 aa19.11■□□□□ 0.65
CLPTM1-202ENST00000541297 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
CLPTM1-202ENST00000541297 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
CLPTM1-202ENST00000541297 DBF4Q9UBU7 674 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-202ENST00000541297 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms