RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 MORC1Q86VD1 984 aa32.9■■■□□ 2.86
LEMD3-203ENST00000541171 UBR3Q6ZT12 1888 aa32.89■■■□□ 2.86
LEMD3-203ENST00000541171 PLEKHO1Q53GL0 409 aaPredicted RBP32.88■■■□□ 2.85
LEMD3-203ENST00000541171 RBM42Q9BTD8 480 aaKnown RBP32.86■■■□□ 2.85
LEMD3-203ENST00000541171 SENP3-EIF4A1A0A087X0R7 540 aa32.85■■■□□ 2.85
LEMD3-203ENST00000541171 ZNF530Q6P9A1 599 aaPredicted RBP32.85■■■□□ 2.85
LEMD3-203ENST00000541171 WWC3Q9ULE0 1092 aa32.85■■■□□ 2.85
LEMD3-203ENST00000541171 ERVV-2B6SEH9 535 aa32.84■■■□□ 2.85
LEMD3-203ENST00000541171 GIGYF1O75420 1035 aaPredicted RBP32.84■■■□□ 2.85
LEMD3-203ENST00000541171 HSP90AB1P08238 724 aaKnown RBP32.84■■■□□ 2.85
LEMD3-203ENST00000541171 DCAF5Q96JK2 942 aa32.84■■■□□ 2.85
LEMD3-203ENST00000541171 AEBP1Q8IUX7 1158 aa32.82■■■□□ 2.84
LEMD3-203ENST00000541171 PLEKHG2Q9H7P9 1386 aa32.82■■■□□ 2.84
LEMD3-203ENST00000541171 AMOTQ4VCS5 1084 aa32.81■■■□□ 2.84
LEMD3-203ENST00000541171 KNSTRNQ9Y448 316 aa32.81■■■□□ 2.84
LEMD3-203ENST00000541171 CABP4P57796 275 aa32.8■■■□□ 2.84
LEMD3-203ENST00000541171 SLC4A9Q96Q91 983 aa32.8■■■□□ 2.84
LEMD3-203ENST00000541171 TRAPPC3LQ5T215 181 aa32.78■■■□□ 2.84
LEMD3-203ENST00000541171 RTCBQ9Y3I0 505 aaKnown RBP32.78■■■□□ 2.84
LEMD3-203ENST00000541171 MTHFSP49914 203 aa32.77■■■□□ 2.84
LEMD3-203ENST00000541171 C1orf141Q5JVX7 400 aa32.77■■■□□ 2.84
LEMD3-203ENST00000541171 SULT6B1Q6IMI4 303 aa32.77■■■□□ 2.84
LEMD3-203ENST00000541171 KDRP35968 1356 aa32.77■■■□□ 2.84
LEMD3-203ENST00000541171 KDM6AO15550 1401 aaPredicted RBP32.76■■■□□ 2.83
LEMD3-203ENST00000541171 MMP10P09238 476 aa32.75■■■□□ 2.83
LEMD3-203ENST00000541171 ATP10DQ9P241 1426 aa32.72■■■□□ 2.83
LEMD3-203ENST00000541171 PTCD1O75127 700 aaKnown RBP32.71■■■□□ 2.83
LEMD3-203ENST00000541171 IL13P35225 146 aa32.71■■■□□ 2.83
LEMD3-203ENST00000541171 ARHGEF1Q92888 912 aaKnown RBP32.71■■■□□ 2.83
LEMD3-203ENST00000541171 RC3H1Q5TC82 1133 aaKnown RBP32.7■■■□□ 2.83
LEMD3-203ENST00000541171 NFATC2IPQ8NCF5 419 aa32.7■■■□□ 2.83
LEMD3-203ENST00000541171 NLGN1Q8N2Q7 840 aa32.69■■■□□ 2.82
LEMD3-203ENST00000541171 CNTNAP4Q9C0A0 1308 aa32.69■■■□□ 2.82
LEMD3-203ENST00000541171 RPS6KA4O75676 772 aa32.68■■■□□ 2.82
LEMD3-203ENST00000541171 RFC4P35249 363 aa32.67■■■□□ 2.82
LEMD3-203ENST00000541171 AMER1Q5JTC6 1135 aaPredicted RBP32.67■■■□□ 2.82
LEMD3-203ENST00000541171 ADRA2BP18089 450 aa32.66■■■□□ 2.82
LEMD3-203ENST00000541171 ZNF526Q8TF50 670 aaPredicted RBP32.66■■■□□ 2.82
LEMD3-203ENST00000541171 GPBP1L1Q9HC44 474 aaPredicted RBP32.65■■■□□ 2.82
LEMD3-203ENST00000541171 KIF7Q2M1P5 1343 aa32.65■■■□□ 2.82
LEMD3-203ENST00000541171 GYS1P13807 737 aa32.63■■■□□ 2.81
LEMD3-203ENST00000541171 ZNF831Q5JPB2 1677 aa32.62■■■□□ 2.81
LEMD3-203ENST00000541171 CICQ96RK0 1608 aaPredicted RBP32.62■■■□□ 2.81
LEMD3-203ENST00000541171 COL5A3P25940 1745 aaPredicted RBP32.61■■■□□ 2.81
LEMD3-203ENST00000541171 CRKLP46109 303 aaKnown RBP32.61■■■□□ 2.81
LEMD3-203ENST00000541171 A0A0G2JLW4 131 aa32.6■■■□□ 2.81
LEMD3-203ENST00000541171 HMOX1P09601 288 aa32.6■■■□□ 2.81
LEMD3-203ENST00000541171 PARP3Q9Y6F1 533 aa32.6■■■□□ 2.81
LEMD3-203ENST00000541171 ADCY9O60503 1353 aa32.59■■■□□ 2.81
LEMD3-203ENST00000541171 AKAP4Q5JQC9 854 aa32.59■■■□□ 2.81
LEMD3-203ENST00000541171 CCDC87Q9NVE4 849 aa32.59■■■□□ 2.81
LEMD3-203ENST00000541171 PXDNLA1KZ92 1463 aa32.59■■■□□ 2.81
LEMD3-203ENST00000541171 TGFB2P61812 414 aa32.58■■■□□ 2.81
LEMD3-203ENST00000541171 BCS1LQ9Y276 419 aa32.58■■■□□ 2.81
LEMD3-203ENST00000541171 CC2D1BQ5T0F9 858 aaKnown RBP32.57■■■□□ 2.8
LEMD3-203ENST00000541171 LGR6Q9HBX8 967 aa32.57■■■□□ 2.8
LEMD3-203ENST00000541171 SRP68Q9UHB9 627 aaKnown RBP32.57■■■□□ 2.8
LEMD3-203ENST00000541171 MYH14Q7Z406 1995 aaKnown RBP32.57■■■□□ 2.8
LEMD3-203ENST00000541171 C10orf71Q711Q0 1435 aa32.54■■■□□ 2.8
LEMD3-203ENST00000541171 DPEP1P16444 411 aa32.54■■■□□ 2.8
LEMD3-203ENST00000541171 CNGB1Q14028 1251 aaPredicted RBP32.54■■■□□ 2.8
LEMD3-203ENST00000541171 SLC52A2Q9HAB3 445 aa32.54■■■□□ 2.8
LEMD3-203ENST00000541171 N4BP2Q86UW6 1770 aaPredicted RBP32.53■■■□□ 2.8
LEMD3-203ENST00000541171 C4AP0C0L4 1744 aa32.51■■■□□ 2.8
LEMD3-203ENST00000541171 KIF13BQ9NQT8 1826 aa32.51■■■□□ 2.8
LEMD3-203ENST00000541171 PER1O15534 1290 aaPredicted RBP32.51■■■□□ 2.79
LEMD3-203ENST00000541171 RNMTO43148 476 aaKnown RBP32.51■■■□□ 2.79
LEMD3-203ENST00000541171 DIAPH1O60610 1272 aaKnown RBP32.51■■■□□ 2.79
LEMD3-203ENST00000541171 DNAJC10Q8IXB1 793 aa32.51■■■□□ 2.79
LEMD3-203ENST00000541171 SCN11AQ9UI33 1791 aa32.5■■■□□ 2.79
LEMD3-203ENST00000541171 SLC39A6Q13433 755 aa32.5■■■□□ 2.79
LEMD3-203ENST00000541171 FKBP8Q14318 412 aa32.5■■■□□ 2.79
LEMD3-203ENST00000541171 INTS5Q6P9B9 1019 aaKnown RBP32.5■■■□□ 2.79
LEMD3-203ENST00000541171 FCHSD2O94868 740 aa32.49■■■□□ 2.79
LEMD3-203ENST00000541171 MTHFSDQ2M296 383 aaKnown RBP32.49■■■□□ 2.79
LEMD3-203ENST00000541171 ARHGAP27Q6ZUM4 889 aa32.49■■■□□ 2.79
LEMD3-203ENST00000541171 USP42Q9H9J4 1324 aaKnown RBP32.49■■■□□ 2.79
LEMD3-203ENST00000541171 TJP1Q07157 1748 aa32.48■■■□□ 2.79
LEMD3-203ENST00000541171 KIAA1551Q9HCM1 1747 aa32.48■■■□□ 2.79
LEMD3-203ENST00000541171 DDR1Q08345 913 aa32.45■■■□□ 2.79
LEMD3-203ENST00000541171 ZPR1O75312 459 aa32.43■■■□□ 2.78
LEMD3-203ENST00000541171 KCNA3P22001 575 aa32.43■■■□□ 2.78
LEMD3-203ENST00000541171 USPL1Q5W0Q7 1092 aa32.43■■■□□ 2.78
LEMD3-203ENST00000541171 CYP19A1P11511 503 aaPredicted RBP32.41■■■□□ 2.78
LEMD3-203ENST00000541171 PIM2Q9P1W9 311 aa32.41■■■□□ 2.78
LEMD3-203ENST00000541171 U2SURPO15042 1029 aaKnown RBP32.4■■■□□ 2.78
LEMD3-203ENST00000541171 SOS1Q07889 1333 aaPredicted RBP32.4■■■□□ 2.78
LEMD3-203ENST00000541171 KIF3CO14782 793 aa32.39■■■□□ 2.78
LEMD3-203ENST00000541171 MRC1P22897 1456 aa32.39■■■□□ 2.78
LEMD3-203ENST00000541171 POLRMTO00411 1230 aaKnown RBP32.38■■■□□ 2.77
LEMD3-203ENST00000541171 TM4SF1P30408 202 aa32.38■■■□□ 2.77
LEMD3-203ENST00000541171 CHRNA5P30532 468 aa32.37■■■□□ 2.77
LEMD3-203ENST00000541171 ZBTB1Q9Y2K1 713 aa32.37■■■□□ 2.77
LEMD3-203ENST00000541171 HSPA6P17066 643 aa32.36■■■□□ 2.77
LEMD3-203ENST00000541171 DALRD3Q5D0E6 543 aaKnown RBP32.36■■■□□ 2.77
LEMD3-203ENST00000541171 KCPQ6ZWJ8 1503 aa32.35■■■□□ 2.77
LEMD3-203ENST00000541171 NARFQ9UHQ1 456 aa32.34■■■□□ 2.77
LEMD3-203ENST00000541171 COL15A1P39059 1388 aa32.33■■■□□ 2.77
LEMD3-203ENST00000541171 CANXP27824 592 aaKnown RBP32.33■■■□□ 2.77
LEMD3-203ENST00000541171 TTC5Q8N0Z6 440 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms