RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
EPB41L3-204ENST00000540638 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
EPB41L3-204ENST00000540638 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.02■□□□□ 0.96
EPB41L3-204ENST00000540638 SRGAP3O43295 1099 aa21.02■□□□□ 0.95
EPB41L3-204ENST00000540638 MYL6BP14649 208 aa21.02■□□□□ 0.95
EPB41L3-204ENST00000540638 SLC39A6Q13433 755 aa21.02■□□□□ 0.95
EPB41L3-204ENST00000540638 SRCIN1Q9C0H9 1055 aa21.01■□□□□ 0.95
EPB41L3-204ENST00000540638 ARHGEF10O15013 1369 aa21.01■□□□□ 0.95
EPB41L3-204ENST00000540638 MCM4P33991 863 aa21■□□□□ 0.95
EPB41L3-204ENST00000540638 IP6K1Q92551 441 aa21■□□□□ 0.95
EPB41L3-204ENST00000540638 MAP3K5Q99683 1374 aa21■□□□□ 0.95
EPB41L3-204ENST00000540638 HSPA2P54652 639 aa21■□□□□ 0.95
EPB41L3-204ENST00000540638 RAPGEF4Q8WZA2 1011 aa21■□□□□ 0.95
EPB41L3-204ENST00000540638 JARID2Q92833 1246 aaPredicted RBP20.99■□□□□ 0.95
EPB41L3-204ENST00000540638 KCNH5Q8NCM2 988 aa20.99■□□□□ 0.95
EPB41L3-204ENST00000540638 ANKRD26Q9UPS8 1709 aa20.98■□□□□ 0.95
EPB41L3-204ENST00000540638 PRAMEF22A3QJZ6 481 aa20.98■□□□□ 0.95
EPB41L3-204ENST00000540638 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
EPB41L3-204ENST00000540638 USP31Q70CQ4 1352 aa20.97■□□□□ 0.95
EPB41L3-204ENST00000540638 K7ELQ4 463 aaPredicted RBP20.97■□□□□ 0.95
EPB41L3-204ENST00000540638 TRAK2O60296 914 aa20.97■□□□□ 0.95
EPB41L3-204ENST00000540638 PPP1R42Q7Z4L9 355 aa20.97■□□□□ 0.95
EPB41L3-204ENST00000540638 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
EPB41L3-204ENST00000540638 PDE1AP54750 535 aa20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 KIAA0232Q92628 1395 aa20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 ITSN1Q15811 1721 aa20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 CEP170BQ9Y4F5 1589 aaPredicted RBP20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 SIL1Q9H173 461 aa20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 NBPF7P0C2Y1 421 aaPredicted RBP20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 NEK4P51957 841 aa20.96■□□□□ 0.95
EPB41L3-204ENST00000540638 CRB1P82279 1406 aa20.95■□□□□ 0.94
EPB41L3-204ENST00000540638 REC8O95072 547 aa20.95■□□□□ 0.94
EPB41L3-204ENST00000540638 MX1P20591 662 aa20.95■□□□□ 0.94
EPB41L3-204ENST00000540638 RBM25P49756 843 aaKnown RBP20.94■□□□□ 0.94
EPB41L3-204ENST00000540638 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
EPB41L3-204ENST00000540638 UPF3BQ9BZI7 483 aaKnown RBP20.94■□□□□ 0.94
EPB41L3-204ENST00000540638 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
EPB41L3-204ENST00000540638 SSFA2P28290 1259 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 TNPO1Q92973 898 aaKnown RBP20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 GBP4Q96PP9 640 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 DIP2AQ14689 1571 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 ST18O60284 1047 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 DTNBO60941 627 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 USP44Q9H0E7 712 aa20.93■□□□□ 0.94
EPB41L3-204ENST00000540638 ERC2O15083 957 aa20.92■□□□□ 0.94
EPB41L3-204ENST00000540638 CHMP3Q9Y3E7 222 aa20.92■□□□□ 0.94
EPB41L3-204ENST00000540638 GOLGA6L22H0YM25 854 aa20.92■□□□□ 0.94
EPB41L3-204ENST00000540638 RIC3Q7Z5B4 369 aa20.92■□□□□ 0.94
EPB41L3-204ENST00000540638 GOLGA6L3A6NEY3 463 aa20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 MAP3K2Q9Y2U5 619 aa20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 PA2G4Q9UQ80 394 aaKnown RBP20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
EPB41L3-204ENST00000540638 DDX54Q8TDD1 881 aaKnown RBP20.9■□□□□ 0.94
EPB41L3-204ENST00000540638 EIF4A1P60842 406 aaKnown RBP20.9■□□□□ 0.94
EPB41L3-204ENST00000540638 KCNJ4P48050 445 aa20.89■□□□□ 0.94
EPB41L3-204ENST00000540638 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
EPB41L3-204ENST00000540638 ATP8B2P98198 1209 aa20.89■□□□□ 0.93
EPB41L3-204ENST00000540638 MCTP1Q6DN14 999 aa20.89■□□□□ 0.93
EPB41L3-204ENST00000540638 MCCP23508 829 aa20.88■□□□□ 0.93
EPB41L3-204ENST00000540638 RABEP1Q15276 862 aa20.88■□□□□ 0.93
EPB41L3-204ENST00000540638 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
EPB41L3-204ENST00000540638 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
EPB41L3-204ENST00000540638 NFATC2IPQ8NCF5 419 aa20.88■□□□□ 0.93
EPB41L3-204ENST00000540638 AKAP4Q5JQC9 854 aa20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 KIF2CQ99661 725 aa20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 DDX49Q9Y6V7 483 aaKnown RBP20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
EPB41L3-204ENST00000540638 RNMTO43148 476 aaKnown RBP20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 CWC27Q6UX04 472 aaKnown RBP20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 ZGPATQ8N5A5 531 aaKnown RBP20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 CHAMP1Q96JM3 812 aa20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 STRN4Q9NRL3 753 aa20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 C3P01024 1663 aa20.86■□□□□ 0.93
EPB41L3-204ENST00000540638 KDRP35968 1356 aa20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 DDX11L8A8MPP1 907 aa20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 DBF4Q9UBU7 674 aaPredicted RBP20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 SSH2Q76I76 1423 aa20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 ATP10DQ9P241 1426 aa20.85■□□□□ 0.93
EPB41L3-204ENST00000540638 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
EPB41L3-204ENST00000540638 ARHGEF25Q86VW2 580 aa20.84■□□□□ 0.93
EPB41L3-204ENST00000540638 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
EPB41L3-204ENST00000540638 AMOTQ4VCS5 1084 aa20.84■□□□□ 0.93
EPB41L3-204ENST00000540638 KLHDC4Q8TBB5 520 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 PEAK1Q9H792 1746 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 RGS12O14924 1447 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
EPB41L3-204ENST00000540638 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.92
EPB41L3-204ENST00000540638 PTCD1O75127 700 aaKnown RBP20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 PKP1Q13835 747 aa20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 PANK2Q9BZ23 570 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms