RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 KDRP35968 1356 aa22.76■■□□□ 1.23
PSMD3-204ENST00000540504 IL13P35225 146 aa22.75■■□□□ 1.23
PSMD3-204ENST00000540504 ITPK1Q13572 414 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 C1orf141Q5JVX7 400 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 AEBP1Q8IUX7 1158 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 UTRNP46939 3433 aa22.74■■□□□ 1.23
PSMD3-204ENST00000540504 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
PSMD3-204ENST00000540504 PHF14O94880 888 aa22.73■■□□□ 1.23
PSMD3-204ENST00000540504 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
PSMD3-204ENST00000540504 KDM6AO15550 1401 aaPredicted RBP22.73■■□□□ 1.23
PSMD3-204ENST00000540504 MTHFSP49914 203 aa22.72■■□□□ 1.23
PSMD3-204ENST00000540504 CABP4P57796 275 aa22.72■■□□□ 1.23
PSMD3-204ENST00000540504 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
PSMD3-204ENST00000540504 GNPATO15228 680 aa22.71■■□□□ 1.23
PSMD3-204ENST00000540504 PELP1Q8IZL8 1130 aaKnown RBP22.71■■□□□ 1.23
PSMD3-204ENST00000540504 GRIN3BO60391 1043 aa22.7■■□□□ 1.22
PSMD3-204ENST00000540504 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
PSMD3-204ENST00000540504 RC3H1Q5TC82 1133 aaKnown RBP22.68■■□□□ 1.22
PSMD3-204ENST00000540504 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
PSMD3-204ENST00000540504 SMIM5Q71RC9 77 aa22.67■■□□□ 1.22
PSMD3-204ENST00000540504 SLC4A9Q96Q91 983 aa22.67■■□□□ 1.22
PSMD3-204ENST00000540504 RTCBQ9Y3I0 505 aaKnown RBP22.67■■□□□ 1.22
PSMD3-204ENST00000540504 COL5A3P25940 1745 aaPredicted RBP22.67■■□□□ 1.22
PSMD3-204ENST00000540504 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
PSMD3-204ENST00000540504 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
PSMD3-204ENST00000540504 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.223e-7■□□□□ 11
PSMD3-204ENST00000540504 ADRA2BP18089 450 aa22.65■■□□□ 1.22
PSMD3-204ENST00000540504 AKAP4Q5JQC9 854 aa22.65■■□□□ 1.22
PSMD3-204ENST00000540504 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
PSMD3-204ENST00000540504 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
PSMD3-204ENST00000540504 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
PSMD3-204ENST00000540504 GOLGB1Q14789 3259 aaKnown RBP22.63■■□□□ 1.21
PSMD3-204ENST00000540504 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
PSMD3-204ENST00000540504 RPS6KA4O75676 772 aa22.62■■□□□ 1.21
PSMD3-204ENST00000540504 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
PSMD3-204ENST00000540504 CICQ96RK0 1608 aaPredicted RBP22.61■■□□□ 1.21
PSMD3-204ENST00000540504 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
PSMD3-204ENST00000540504 HMOX1P09601 288 aa22.6■■□□□ 1.21
PSMD3-204ENST00000540504 ARHGEF1Q92888 912 aaKnown RBP22.6■■□□□ 1.21
PSMD3-204ENST00000540504 MYH14Q7Z406 1995 aaKnown RBP22.58■■□□□ 1.21
PSMD3-204ENST00000540504 MMP10P09238 476 aa22.58■■□□□ 1.21
PSMD3-204ENST00000540504 RFC4P35249 363 aa22.58■■□□□ 1.21
PSMD3-204ENST00000540504 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
PSMD3-204ENST00000540504 MRC1P22897 1456 aa22.57■■□□□ 1.2
PSMD3-204ENST00000540504 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
PSMD3-204ENST00000540504 RNMTO43148 476 aaKnown RBP22.56■■□□□ 1.2
PSMD3-204ENST00000540504 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
PSMD3-204ENST00000540504 KIF13BQ9NQT8 1826 aa22.56■■□□□ 1.2
PSMD3-204ENST00000540504 TJP1Q07157 1748 aa22.56■■□□□ 1.2
PSMD3-204ENST00000540504 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
PSMD3-204ENST00000540504 C4AP0C0L4 1744 aa22.55■■□□□ 1.2
PSMD3-204ENST00000540504 GYS1P13807 737 aa22.55■■□□□ 1.2
PSMD3-204ENST00000540504 MTHFSDQ2M296 383 aaKnown RBP22.55■■□□□ 1.2
PSMD3-204ENST00000540504 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
PSMD3-204ENST00000540504 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
PSMD3-204ENST00000540504 TGFB2P61812 414 aa22.52■■□□□ 1.2
PSMD3-204ENST00000540504 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
PSMD3-204ENST00000540504 PARP3Q9Y6F1 533 aa22.51■■□□□ 1.19
PSMD3-204ENST00000540504 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
PSMD3-204ENST00000540504 U2SURPO15042 1029 aaKnown RBP22.5■■□□□ 1.19
PSMD3-204ENST00000540504 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
PSMD3-204ENST00000540504 CNGB1Q14028 1251 aaPredicted RBP22.49■■□□□ 1.19
PSMD3-204ENST00000540504 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
PSMD3-204ENST00000540504 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
PSMD3-204ENST00000540504 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
PSMD3-204ENST00000540504 PXDNLA1KZ92 1463 aa22.48■■□□□ 1.19
PSMD3-204ENST00000540504 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
PSMD3-204ENST00000540504 DNAJC10Q8IXB1 793 aa22.48■■□□□ 1.19
PSMD3-204ENST00000540504 VSIG10Q8N0Z9 540 aa22.48■■□□□ 1.19
PSMD3-204ENST00000540504 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
PSMD3-204ENST00000540504 KIAA1551Q9HCM1 1747 aa22.48■■□□□ 1.19
PSMD3-204ENST00000540504 KCPQ6ZWJ8 1503 aa22.47■■□□□ 1.19
PSMD3-204ENST00000540504 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
PSMD3-204ENST00000540504 CYP19A1P11511 503 aaPredicted RBP22.46■■□□□ 1.19
PSMD3-204ENST00000540504 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.19
PSMD3-204ENST00000540504 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.18
PSMD3-204ENST00000540504 SRP68Q9UHB9 627 aaKnown RBP22.45■■□□□ 1.18
PSMD3-204ENST00000540504 ADCY9O60503 1353 aa22.45■■□□□ 1.18
PSMD3-204ENST00000540504 ATP10DQ9P241 1426 aa22.45■■□□□ 1.18
PSMD3-204ENST00000540504 N4BP2Q86UW6 1770 aaPredicted RBP22.45■■□□□ 1.18
PSMD3-204ENST00000540504 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
PSMD3-204ENST00000540504 WWC3Q9ULE0 1092 aa22.44■■□□□ 1.18
PSMD3-204ENST00000540504 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
PSMD3-204ENST00000540504 ZPR1O75312 459 aa22.43■■□□□ 1.18
PSMD3-204ENST00000540504 TEFQ10587 303 aa22.43■■□□□ 1.18
PSMD3-204ENST00000540504 FKBP8Q14318 412 aa22.43■■□□□ 1.18
PSMD3-204ENST00000540504 TTC5Q8N0Z6 440 aa22.43■■□□□ 1.18
PSMD3-204ENST00000540504 A0A0G2JLW4 131 aa22.42■■□□□ 1.18
PSMD3-204ENST00000540504 IL17REQ8NFR9 667 aa22.41■■□□□ 1.18
PSMD3-204ENST00000540504 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
PSMD3-204ENST00000540504 BRCA1P38398 1863 aaKnown RBP22.41■■□□□ 1.18
PSMD3-204ENST00000540504 COL15A1P39059 1388 aa22.4■■□□□ 1.18
PSMD3-204ENST00000540504 DPEP1P16444 411 aa22.4■■□□□ 1.18
PSMD3-204ENST00000540504 TM4SF1P30408 202 aa22.4■■□□□ 1.18
PSMD3-204ENST00000540504 NARFQ9UHQ1 456 aa22.4■■□□□ 1.18
PSMD3-204ENST00000540504 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
PSMD3-204ENST00000540504 STARD3NLO95772 234 aa22.39■■□□□ 1.17
PSMD3-204ENST00000540504 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms