RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
LRP6-204ENST00000540415 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
LRP6-204ENST00000540415 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
LRP6-204ENST00000540415 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
LRP6-204ENST00000540415 INSRP06213 1382 aa11.29□□□□□ -0.6
LRP6-204ENST00000540415 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
LRP6-204ENST00000540415 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
LRP6-204ENST00000540415 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
LRP6-204ENST00000540415 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
LRP6-204ENST00000540415 FSTL1Q12841 308 aa11.28□□□□□ -0.6
LRP6-204ENST00000540415 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
LRP6-204ENST00000540415 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
LRP6-204ENST00000540415 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
LRP6-204ENST00000540415 FLT4P35916 1363 aa11.28□□□□□ -0.6
LRP6-204ENST00000540415 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 GYS1P13807 737 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 HMGB2P26583 209 aaKnown RBP11.27□□□□□ -0.61
LRP6-204ENST00000540415 TMF1P82094 1093 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 ITGB4P16144 1822 aa11.27□□□□□ -0.61
LRP6-204ENST00000540415 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
LRP6-204ENST00000540415 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
LRP6-204ENST00000540415 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
LRP6-204ENST00000540415 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
LRP6-204ENST00000540415 KDRP35968 1356 aa11.26□□□□□ -0.61
LRP6-204ENST00000540415 KIF13BQ9NQT8 1826 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 CHRNA5P30532 468 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 NLGN1Q8N2Q7 840 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 DCAF5Q96JK2 942 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 PLEKHG2Q9H7P9 1386 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
LRP6-204ENST00000540415 PHKG2P15735 406 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 RASSF7Q02833 373 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 DDR1Q08345 913 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 EYA1Q99502 592 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
LRP6-204ENST00000540415 SRP68Q9UHB9 627 aaKnown RBP11.24□□□□□ -0.61
LRP6-204ENST00000540415 SPG7Q9UQ90 795 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 KDM2BQ8NHM5 1336 aa11.24□□□□□ -0.61
LRP6-204ENST00000540415 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
LRP6-204ENST00000540415 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
LRP6-204ENST00000540415 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
LRP6-204ENST00000540415 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
LRP6-204ENST00000540415 RFC4P35249 363 aa11.22□□□□□ -0.61
LRP6-204ENST00000540415 FKBP8Q14318 412 aa11.22□□□□□ -0.61
LRP6-204ENST00000540415 IFNL2Q8IZJ0 200 aa11.22□□□□□ -0.61
LRP6-204ENST00000540415 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
LRP6-204ENST00000540415 TONSLQ96HA7 1378 aa11.21□□□□□ -0.61
LRP6-204ENST00000540415 RPS6KA4O75676 772 aa11.21□□□□□ -0.61
LRP6-204ENST00000540415 RC3H1Q5TC82 1133 aaKnown RBP11.21□□□□□ -0.61
LRP6-204ENST00000540415 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
LRP6-204ENST00000540415 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
LRP6-204ENST00000540415 CNTNAP4Q9C0A0 1308 aa11.2□□□□□ -0.62
LRP6-204ENST00000540415 ADRA2BP18089 450 aa11.2□□□□□ -0.62
LRP6-204ENST00000540415 BRCA1P38398 1863 aaKnown RBP11.2□□□□□ -0.62
LRP6-204ENST00000540415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.626e-7■□□□□ 8.9
LRP6-204ENST00000540415 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
LRP6-204ENST00000540415 POLRMTO00411 1230 aaKnown RBP11.18□□□□□ -0.62
LRP6-204ENST00000540415 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
LRP6-204ENST00000540415 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
LRP6-204ENST00000540415 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
LRP6-204ENST00000540415 USP42Q9H9J4 1324 aaKnown RBP11.17□□□□□ -0.62
LRP6-204ENST00000540415 POTECB2RU33 542 aa11.17□□□□□ -0.62
LRP6-204ENST00000540415 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
LRP6-204ENST00000540415 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
LRP6-204ENST00000540415 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
LRP6-204ENST00000540415 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
LRP6-204ENST00000540415 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
LRP6-204ENST00000540415 VEGFAP15692 232 aaPredicted RBP11.16□□□□□ -0.62
LRP6-204ENST00000540415 TM4SF1P30408 202 aa11.16□□□□□ -0.62
LRP6-204ENST00000540415 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
LRP6-204ENST00000540415 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
LRP6-204ENST00000540415 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.62
LRP6-204ENST00000540415 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.62
LRP6-204ENST00000540415 NFKBIEO00221 500 aa11.15□□□□□ -0.62
LRP6-204ENST00000540415 LMNB1P20700 586 aa11.15□□□□□ -0.62
LRP6-204ENST00000540415 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.62
LRP6-204ENST00000540415 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
LRP6-204ENST00000540415 FOXN1O15353 648 aa11.14□□□□□ -0.63
LRP6-204ENST00000540415 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
LRP6-204ENST00000540415 POTEJP0CG39 1038 aa11.14□□□□□ -0.63
LRP6-204ENST00000540415 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
LRP6-204ENST00000540415 CABP4P57796 275 aa11.14□□□□□ -0.63
LRP6-204ENST00000540415 USPL1Q5W0Q7 1092 aa11.14□□□□□ -0.63
LRP6-204ENST00000540415 SLC34A2O95436 690 aa11.13□□□□□ -0.63
LRP6-204ENST00000540415 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
LRP6-204ENST00000540415 CARMIL3Q8ND23 1372 aa11.13□□□□□ -0.63
LRP6-204ENST00000540415 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
LRP6-204ENST00000540415 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
LRP6-204ENST00000540415 NFIXQ14938 502 aa11.12□□□□□ -0.63
LRP6-204ENST00000540415 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
LRP6-204ENST00000540415 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
LRP6-204ENST00000540415 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
LRP6-204ENST00000540415 SBF1O95248 1867 aa11.11□□□□□ -0.63
LRP6-204ENST00000540415 DNAJC10Q8IXB1 793 aa11.11□□□□□ -0.63
LRP6-204ENST00000540415 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
LRP6-204ENST00000540415 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms