RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 WFS1O76024 890 aa9.44□□□□□ -0.9
MRE11-209ENST00000540013 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
MRE11-209ENST00000540013 GDF10P55107 478 aa9.44□□□□□ -0.9
MRE11-209ENST00000540013 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
MRE11-209ENST00000540013 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
MRE11-209ENST00000540013 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
MRE11-209ENST00000540013 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
MRE11-209ENST00000540013 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L21D6R901 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 INHAP05111 366 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 CLDN10P78369 228 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
MRE11-209ENST00000540013 TTLL8A6PVC2 850 aa9.42□□□□□ -0.9
MRE11-209ENST00000540013 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
MRE11-209ENST00000540013 INSM1Q01101 510 aaPredicted RBP9.42□□□□□ -0.9
MRE11-209ENST00000540013 TPCN2Q8NHX9 752 aa9.42□□□□□ -0.9
MRE11-209ENST00000540013 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
MRE11-209ENST00000540013 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
MRE11-209ENST00000540013 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
MRE11-209ENST00000540013 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
MRE11-209ENST00000540013 ETNK1Q9HBU6 452 aa9.42□□□□□ -0.9
MRE11-209ENST00000540013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
MRE11-209ENST00000540013 M0R2N6 131 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 ATG7O95352 703 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 SCNN1DP51172 638 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 PTK7Q13308 1070 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
MRE11-209ENST00000540013 RAB6BQ9NRW1 208 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
MRE11-209ENST00000540013 SOS2Q07890 1332 aaPredicted RBP9.4□□□□□ -0.9
MRE11-209ENST00000540013 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
MRE11-209ENST00000540013 IL2RAP01589 272 aa9.4□□□□□ -0.9
MRE11-209ENST00000540013 HSP90B1P14625 803 aaKnown RBP9.4□□□□□ -0.9
MRE11-209ENST00000540013 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.9
MRE11-209ENST00000540013 SEC13P55735 322 aa9.4□□□□□ -0.9
MRE11-209ENST00000540013 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
MRE11-209ENST00000540013 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
MRE11-209ENST00000540013 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
MRE11-209ENST00000540013 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 C11orf95C9JLR9 678 aaPredicted RBP9.39□□□□□ -0.91
MRE11-209ENST00000540013 MAN1A2O60476 641 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 TLR1Q15399 786 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.91
MRE11-209ENST00000540013 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
MRE11-209ENST00000540013 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 SLC4A9Q96Q91 983 aa9.39□□□□□ -0.91
MRE11-209ENST00000540013 GMPR2Q9P2T1 348 aaKnown RBP9.39□□□□□ -0.91
MRE11-209ENST00000540013 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
MRE11-209ENST00000540013 CDK11BP21127 795 aaKnown RBP9.38□□□□□ -0.91
MRE11-209ENST00000540013 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
MRE11-209ENST00000540013 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
MRE11-209ENST00000540013 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
MRE11-209ENST00000540013 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
MRE11-209ENST00000540013 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
MRE11-209ENST00000540013 WIPF1O43516 503 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 SMTNP53814 917 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 CENPCQ03188 943 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 DPYDQ12882 1025 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 RNF217Q8TC41 542 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
MRE11-209ENST00000540013 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
MRE11-209ENST00000540013 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
MRE11-209ENST00000540013 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
MRE11-209ENST00000540013 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
MRE11-209ENST00000540013 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
MRE11-209ENST00000540013 GRIP2Q9C0E4 1043 aa9.36□□□□□ -0.91
MRE11-209ENST00000540013 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
MRE11-209ENST00000540013 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
MRE11-209ENST00000540013 A6NJY4 79 aa9.35□□□□□ -0.91
MRE11-209ENST00000540013 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
MRE11-209ENST00000540013 PDE4CQ08493 712 aa9.35□□□□□ -0.91
MRE11-209ENST00000540013 MTFR1Q15390 333 aa9.35□□□□□ -0.91
MRE11-209ENST00000540013 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
MRE11-209ENST00000540013 TMEM214Q6NUQ4 689 aaKnown RBP9.35□□□□□ -0.91
MRE11-209ENST00000540013 SPATA31C2B4DYI2 1134 aa9.34□□□□□ -0.91
MRE11-209ENST00000540013 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
MRE11-209ENST00000540013 DKK1O94907 266 aa9.34□□□□□ -0.91
MRE11-209ENST00000540013 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
MRE11-209ENST00000540013 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
MRE11-209ENST00000540013 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
MRE11-209ENST00000540013 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
MRE11-209ENST00000540013 FHDC1Q9C0D6 1143 aaPredicted RBP9.34□□□□□ -0.91
MRE11-209ENST00000540013 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
MRE11-209ENST00000540013 RHBDD1Q8TEB9 315 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms