RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 CCDC27Q2M243 656 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 TAS1R3Q7RTX0 852 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 ZNF598Q86UK7 904 aaKnown RBP5.49□□□□□ -1.53
SNHG1-210ENST00000539303 CCDC125Q86Z20 511 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 PRKD2Q9BZL6 878 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 ESF1Q9H501 851 aaKnown RBP5.49□□□□□ -1.53
SNHG1-210ENST00000539303 M0R2N6 131 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 IL2RAP01589 272 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 NOM1Q5C9Z4 860 aaKnown RBP5.48□□□□□ -1.53
SNHG1-210ENST00000539303 C1orf216Q8TAB5 229 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 SCG3Q8WXD2 468 aaKnown RBP5.48□□□□□ -1.53
SNHG1-210ENST00000539303 ITPKCQ96DU7 683 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 AGBL1Q96MI9 1066 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
SNHG1-210ENST00000539303 A0A1W2PRU2 124 aa5.47□□□□□ -1.53
SNHG1-210ENST00000539303 WASLO00401 505 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-210ENST00000539303 NAA30Q147X3 362 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-210ENST00000539303 CYP2U1Q7Z449 544 aa5.47□□□□□ -1.53
SNHG1-210ENST00000539303 CHMP7Q8WUX9 453 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-210ENST00000539303 KLF16Q9BXK1 252 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-210ENST00000539303 DNMT3AQ9Y6K1 912 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-210ENST00000539303 WASF2Q9Y6W5 498 aa5.47□□□□□ -1.53
SNHG1-210ENST00000539303 ATAD2Q6PL18 1390 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 H3BRB1 525 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 GDF9O60383 454 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 ZIC2O95409 532 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-210ENST00000539303 ADH1AP07327 375 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 ECM1Q16610 540 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 SH3PXD2AQ5TCZ1 1133 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 TRIM67Q6ZTA4 783 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 SLC9A9Q8IVB4 645 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 GTF3C2Q8WUA4 911 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-210ENST00000539303 TUT1Q9H6E5 874 aaKnown RBP5.46□□□□□ -1.54
SNHG1-210ENST00000539303 PGPEP1Q9NXJ5 209 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 BIN2Q9UBW5 565 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-210ENST00000539303 EMILIN1Q9Y6C2 1016 aa5.46□□□□□ -1.54
SNHG1-210ENST00000539303 A6NJY4 79 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 BACH1O14867 736 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 GNRH1P01148 92 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 IGFBP4P22692 258 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 FOXK2Q01167 660 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 RELBQ01201 579 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 SNIP1Q8TAD8 396 aaKnown RBP5.45□□□□□ -1.54
SNHG1-210ENST00000539303 SLC4A9Q96Q91 983 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 SAP130Q9H0E3 1048 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 HRH3Q9Y5N1 445 aa5.45□□□□□ -1.54
SNHG1-210ENST00000539303 TTC24A2A3L6 582 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 ICMTO60725 284 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 RGS20O76081 388 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 TIMP2P16035 220 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 SMPD1P17405 629 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 WDR4P57081 412 aaKnown RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 TLR1Q15399 786 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 DNAJC14Q6Y2X3 702 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 HPS1Q92902 700 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 CNKSR1Q969H4 720 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 XAGE2Q96GT9 111 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 ZNF395Q9H8N7 513 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 TOR4AQ9NXH8 423 aa5.44□□□□□ -1.54
SNHG1-210ENST00000539303 SCHIP1Q9P0W5 487 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 IQSEC3Q9UPP2 1182 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-210ENST00000539303 MEN1O00255 615 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 FOXO3O43524 673 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 PPP1R12BO60237 982 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-210ENST00000539303 RBM25P49756 843 aaKnown RBP5.43□□□□□ -1.54
SNHG1-210ENST00000539303 SMTNP53814 917 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 MTFR1Q15390 333 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 FAM26DQ5JW98 314 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 Q6ZVU0 165 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 FHDC1Q9C0D6 1143 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-210ENST00000539303 PARP3Q9Y6F1 533 aa5.43□□□□□ -1.54
SNHG1-210ENST00000539303 V9GY48 417 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-210ENST00000539303 CLN3Q13286 438 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 ESCO1Q5FWF5 840 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 GLYCTKQ8IVS8 523 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 CYP4X1Q8N118 509 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 ZDHHC1Q8WTX9 485 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 ESYT1Q9BSJ8 1104 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 EGFL7Q9UHF1 273 aa5.42□□□□□ -1.54
SNHG1-210ENST00000539303 MPSTP25325 297 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 PTGIRP43119 386 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 MARSP56192 900 aaKnown RBP5.41□□□□□ -1.54
SNHG1-210ENST00000539303 ARHGAP4P98171 946 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 CENPCQ03188 943 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 ZNF295-AS1Q8N0V1 137 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 HELQQ8TDG4 1101 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 NGLY1Q96IV0 654 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 C2orf49Q9BVC5 232 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-210ENST00000539303 QTRT2Q9H974 415 aaKnown RBP5.41□□□□□ -1.54
SNHG1-210ENST00000539303 LRFN2Q9ULH4 789 aa5.41□□□□□ -1.54
SNHG1-210ENST00000539303 TNFRSF10BO14763 440 aa5.4□□□□□ -1.54
SNHG1-210ENST00000539303 PTCD1O75127 700 aaKnown RBP5.4□□□□□ -1.54
SNHG1-210ENST00000539303 FKBP4Q02790 459 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNHG1-210ENST00000539303 COX20Q5RI15 118 aa5.4□□□□□ -1.54
SNHG1-210ENST00000539303 MEIOBQ8N635 442 aa5.4□□□□□ -1.54
SNHG1-210ENST00000539303 COL26A1Q96A83 441 aa5.4□□□□□ -1.54
SNHG1-210ENST00000539303 KLRG1Q96E93 195 aa5.4□□□□□ -1.54
SNHG1-210ENST00000539303 INSM2Q96T92 566 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-210ENST00000539303 UNCXA6NJT0 531 aa5.39□□□□□ -1.55
SNHG1-210ENST00000539303 EML1O00423 815 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms