RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TMEM57Q8N5G2 664 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 NAPBQ9H115 298 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 ANKRD62A6NC57 917 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 CASTP20810 708 aaKnown RBP19.7■□□□□ 0.74
SCARB1-205ENST00000538291 DNAI2Q9GZS0 605 aa19.7■□□□□ 0.74
SCARB1-205ENST00000538291 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
SCARB1-205ENST00000538291 CCDC196A0A1B0GTZ2 297 aa19.69■□□□□ 0.74
SCARB1-205ENST00000538291 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
SCARB1-205ENST00000538291 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
SCARB1-205ENST00000538291 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
SCARB1-205ENST00000538291 EPRSP07814 1512 aaKnown RBP19.69■□□□□ 0.74
SCARB1-205ENST00000538291 SMTNL1A8MU46 457 aa19.69■□□□□ 0.74
SCARB1-205ENST00000538291 MX1P20591 662 aa19.69■□□□□ 0.74
SCARB1-205ENST00000538291 RPGRQ92834 1020 aaKnown RBP19.69■□□□□ 0.74
SCARB1-205ENST00000538291 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
SCARB1-205ENST00000538291 SLC5A1P13866 664 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 IBSPP21815 317 aaPredicted RBP19.68■□□□□ 0.74
SCARB1-205ENST00000538291 SLF2Q8IX21 1173 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 TSPYL1Q9H0U9 437 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 PPP4R3AQ6IN85 833 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 CTCFLQ8NI51 663 aaPredicted RBP19.68■□□□□ 0.74
SCARB1-205ENST00000538291 SCLT1Q96NL6 688 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
SCARB1-205ENST00000538291 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
SCARB1-205ENST00000538291 THUMPD2Q9BTF0 503 aaKnown RBP19.67■□□□□ 0.74
SCARB1-205ENST00000538291 FOXO3O43524 673 aa19.67■□□□□ 0.74
SCARB1-205ENST00000538291 EXOC5O00471 708 aa19.67■□□□□ 0.74
SCARB1-205ENST00000538291 IQCEQ6IPM2 695 aa19.67■□□□□ 0.74
SCARB1-205ENST00000538291 CIZ1Q9ULV3 898 aaPredicted RBP19.67■□□□□ 0.74
SCARB1-205ENST00000538291 AKNAQ7Z591 1439 aa19.66■□□□□ 0.74
SCARB1-205ENST00000538291 ZNF444Q8N0Y2 327 aaPredicted RBP19.66■□□□□ 0.74
SCARB1-205ENST00000538291 USHBP1Q8N6Y0 703 aa19.66■□□□□ 0.74
SCARB1-205ENST00000538291 ERLIN1O75477 346 aa19.66■□□□□ 0.74
SCARB1-205ENST00000538291 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
SCARB1-205ENST00000538291 SLFN5Q08AF3 891 aa19.66■□□□□ 0.74
SCARB1-205ENST00000538291 ANKRD18BA2A2Z9 1011 aa19.65■□□□□ 0.74
SCARB1-205ENST00000538291 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
SCARB1-205ENST00000538291 AMOTL2Q9Y2J4 779 aa19.65■□□□□ 0.74
SCARB1-205ENST00000538291 IQCA1Q86XH1 822 aa19.65■□□□□ 0.74
SCARB1-205ENST00000538291 TAF4BQ92750 862 aa19.65■□□□□ 0.74
SCARB1-205ENST00000538291 ABCC11Q96J66 1382 aa19.64■□□□□ 0.74
SCARB1-205ENST00000538291 TTLL12Q14166 644 aaPredicted RBP19.64■□□□□ 0.74
SCARB1-205ENST00000538291 CCDC96Q2M329 555 aa19.64■□□□□ 0.74
SCARB1-205ENST00000538291 NME9Q86XW9 330 aa19.64■□□□□ 0.74
SCARB1-205ENST00000538291 FAM177A1Q8N128 213 aaPredicted RBP19.64■□□□□ 0.74
SCARB1-205ENST00000538291 CCDC112Q8NEF3 446 aa19.64■□□□□ 0.74
SCARB1-205ENST00000538291 HYPKQ9NX55 129 aa19.64■□□□□ 0.74
SCARB1-205ENST00000538291 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
SCARB1-205ENST00000538291 ALDH1L2Q3SY69 923 aa19.64■□□□□ 0.73
SCARB1-205ENST00000538291 LEKR1Q6ZMV7 388 aa19.64■□□□□ 0.73
SCARB1-205ENST00000538291 CUL5Q93034 780 aa19.64■□□□□ 0.73
SCARB1-205ENST00000538291 CETN2P41208 172 aa19.64■□□□□ 0.73
SCARB1-205ENST00000538291 SSR1P43307 286 aaKnown RBP19.64■□□□□ 0.73
SCARB1-205ENST00000538291 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
SCARB1-205ENST00000538291 BACH2Q9BYV9 841 aa19.64■□□□□ 0.73
SCARB1-205ENST00000538291 CCDC141Q6ZP82 1450 aa19.63■□□□□ 0.73
SCARB1-205ENST00000538291 ENOX2Q16206 610 aaKnown RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 ZNF397Q8NF99 534 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 RNF41Q9H4P4 317 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 EPB41L2O43491 1005 aaKnown RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 JAKMIP3Q5VZ66 844 aa19.63■□□□□ 0.73
SCARB1-205ENST00000538291 DNAAF4Q8WXU2 420 aa19.63■□□□□ 0.73
SCARB1-205ENST00000538291 RAB34Q9BZG1 259 aa19.63■□□□□ 0.73
SCARB1-205ENST00000538291 RANBP6O60518 1105 aaKnown RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 EZRP15311 586 aaKnown RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-205ENST00000538291 PHAXQ9H814 394 aaKnown RBP19.62■□□□□ 0.73
SCARB1-205ENST00000538291 TEX13AQ9BXU3 409 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-205ENST00000538291 CHMP4BP1P59074 171 aa19.62■□□□□ 0.73
SCARB1-205ENST00000538291 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
SCARB1-205ENST00000538291 KIAA1328Q86T90 577 aa19.62■□□□□ 0.73
SCARB1-205ENST00000538291 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
SCARB1-205ENST00000538291 WASLO00401 505 aaPredicted RBP19.61■□□□□ 0.73
SCARB1-205ENST00000538291 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
SCARB1-205ENST00000538291 TSG101Q99816 390 aa19.61■□□□□ 0.73
SCARB1-205ENST00000538291 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
SCARB1-205ENST00000538291 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
SCARB1-205ENST00000538291 C6orf229H3BNL8 230 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 FILIP1Q7Z7B0 1213 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 TAX1BP1Q86VP1 789 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 A0A087WZG4 1122 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 TMEM266Q2M3C6 531 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 CCDC83Q8IWF9 413 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
SCARB1-205ENST00000538291 ZNF213O14771 459 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 CFAP100Q494V2 611 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 SLC12A7Q9Y666 1083 aa19.6■□□□□ 0.73
SCARB1-205ENST00000538291 EIF3JO75822 258 aaKnown RBP19.59■□□□□ 0.73
SCARB1-205ENST00000538291 ARHGAP29Q52LW3 1261 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 CENPHQ9H3R5 247 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 PAXIP1Q6ZW49 1069 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-205ENST00000538291 GBP2P32456 591 aaPredicted RBP19.59■□□□□ 0.73
SCARB1-205ENST00000538291 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 LDHCP07864 332 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 FERMT3Q86UX7 667 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
SCARB1-205ENST00000538291 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms