RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
VPS37C-204ENST00000538036 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
VPS37C-204ENST00000538036 ITGB4P16144 1822 aa14.17□□□□□ -0.14
VPS37C-204ENST00000538036 TOGARAM1Q9Y4F4 1720 aa14.16□□□□□ -0.14
VPS37C-204ENST00000538036 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
VPS37C-204ENST00000538036 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
VPS37C-204ENST00000538036 WWC3Q9ULE0 1092 aa14.16□□□□□ -0.14
VPS37C-204ENST00000538036 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
VPS37C-204ENST00000538036 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
VPS37C-204ENST00000538036 TOMM70O94826 608 aa14.15□□□□□ -0.14
VPS37C-204ENST00000538036 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
VPS37C-204ENST00000538036 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
VPS37C-204ENST00000538036 CCDC87Q9NVE4 849 aa14.14□□□□□ -0.15
VPS37C-204ENST00000538036 CICQ96RK0 1608 aaPredicted RBP14.14□□□□□ -0.15
VPS37C-204ENST00000538036 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
VPS37C-204ENST00000538036 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
VPS37C-204ENST00000538036 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
VPS37C-204ENST00000538036 BCS1LQ9Y276 419 aa14.13□□□□□ -0.15
VPS37C-204ENST00000538036 KDRP35968 1356 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 RFC4P35249 363 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
VPS37C-204ENST00000538036 PARP3Q9Y6F1 533 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 CNTNAP4Q9C0A0 1308 aa14.12□□□□□ -0.15
VPS37C-204ENST00000538036 GYS1P13807 737 aa14.11□□□□□ -0.15
VPS37C-204ENST00000538036 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
VPS37C-204ENST00000538036 AMOTQ4VCS5 1084 aa14.11□□□□□ -0.15
VPS37C-204ENST00000538036 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
VPS37C-204ENST00000538036 C10orf71Q711Q0 1435 aa14.11□□□□□ -0.15
VPS37C-204ENST00000538036 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
VPS37C-204ENST00000538036 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
VPS37C-204ENST00000538036 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
VPS37C-204ENST00000538036 FCHSD2O94868 740 aa14.1□□□□□ -0.15
VPS37C-204ENST00000538036 DPEP1P16444 411 aa14.1□□□□□ -0.15
VPS37C-204ENST00000538036 DNAJC5GQ8N7S2 189 aa14.1□□□□□ -0.15
VPS37C-204ENST00000538036 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
VPS37C-204ENST00000538036 CABP4P57796 275 aa14.09□□□□□ -0.15
VPS37C-204ENST00000538036 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
VPS37C-204ENST00000538036 ZNF831Q5JPB2 1677 aa14.09□□□□□ -0.15
VPS37C-204ENST00000538036 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.15
VPS37C-204ENST00000538036 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
VPS37C-204ENST00000538036 KCNA3P22001 575 aa14.07□□□□□ -0.16
VPS37C-204ENST00000538036 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
VPS37C-204ENST00000538036 NMRK2Q9NPI5 230 aa14.07□□□□□ -0.16
VPS37C-204ENST00000538036 MTHFSP49914 203 aa14.06□□□□□ -0.16
VPS37C-204ENST00000538036 FSTL1Q12841 308 aa14.06□□□□□ -0.16
VPS37C-204ENST00000538036 DALRD3Q5D0E6 543 aaKnown RBP14.06□□□□□ -0.16
VPS37C-204ENST00000538036 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
VPS37C-204ENST00000538036 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
VPS37C-204ENST00000538036 KDM2BQ8NHM5 1336 aa14.06□□□□□ -0.16
VPS37C-204ENST00000538036 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
VPS37C-204ENST00000538036 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
VPS37C-204ENST00000538036 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
VPS37C-204ENST00000538036 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
VPS37C-204ENST00000538036 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
VPS37C-204ENST00000538036 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
VPS37C-204ENST00000538036 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
VPS37C-204ENST00000538036 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
VPS37C-204ENST00000538036 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
VPS37C-204ENST00000538036 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
VPS37C-204ENST00000538036 FKBP8Q14318 412 aa14.02□□□□□ -0.17
VPS37C-204ENST00000538036 ZC3H4Q9UPT8 1303 aaKnown RBP14.01□□□□□ -0.17
VPS37C-204ENST00000538036 TM4SF1P30408 202 aa14.01□□□□□ -0.17
VPS37C-204ENST00000538036 JMYQ8N9B5 988 aa14.01□□□□□ -0.17
VPS37C-204ENST00000538036 KLRG1Q96E93 195 aa14.01□□□□□ -0.17
VPS37C-204ENST00000538036 RNF181Q9P0P0 153 aa14.01□□□□□ -0.17
VPS37C-204ENST00000538036 COL5A3P25940 1745 aaPredicted RBP14.01□□□□□ -0.17
VPS37C-204ENST00000538036 ZPR1O75312 459 aa14□□□□□ -0.17
VPS37C-204ENST00000538036 DDR1Q08345 913 aa14□□□□□ -0.17
VPS37C-204ENST00000538036 INTS5Q6P9B9 1019 aaKnown RBP14□□□□□ -0.17
VPS37C-204ENST00000538036 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
VPS37C-204ENST00000538036 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
VPS37C-204ENST00000538036 POLRMTO00411 1230 aaKnown RBP13.99□□□□□ -0.17
VPS37C-204ENST00000538036 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
VPS37C-204ENST00000538036 PANK3Q9H999 370 aa13.99□□□□□ -0.17
VPS37C-204ENST00000538036 CHRNA5P30532 468 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 MORC1Q86VD1 984 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 ARFGEF1Q9Y6D6 1849 aa13.98□□□□□ -0.17
VPS37C-204ENST00000538036 BRCA1P38398 1863 aaKnown RBP13.97□□□□□ -0.17
VPS37C-204ENST00000538036 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
VPS37C-204ENST00000538036 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
VPS37C-204ENST00000538036 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
VPS37C-204ENST00000538036 AKAP4Q5JQC9 854 aa13.97□□□□□ -0.17
VPS37C-204ENST00000538036 KCPQ6ZWJ8 1503 aa13.96□□□□□ -0.17
VPS37C-204ENST00000538036 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS37C-204ENST00000538036 USPL1Q5W0Q7 1092 aa13.96□□□□□ -0.17
VPS37C-204ENST00000538036 SLC52A2Q9HAB3 445 aa13.96□□□□□ -0.17
VPS37C-204ENST00000538036 NARFQ9UHQ1 456 aa13.96□□□□□ -0.17
VPS37C-204ENST00000538036 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
VPS37C-204ENST00000538036 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
VPS37C-204ENST00000538036 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
VPS37C-204ENST00000538036 LMNB1P20700 586 aa13.95□□□□□ -0.18
VPS37C-204ENST00000538036 IL13P35225 146 aa13.95□□□□□ -0.18
VPS37C-204ENST00000538036 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
VPS37C-204ENST00000538036 WDR90Q96KV7 1748 aa13.95□□□□□ -0.18
VPS37C-204ENST00000538036 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms