RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ESCO1Q5FWF5 840 aa10.85□□□□□ -0.67
VBP1-203ENST00000535916 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
VBP1-203ENST00000535916 GPAMQ9HCL2 828 aa10.85□□□□□ -0.67
VBP1-203ENST00000535916 IGF1RP08069 1367 aa10.85□□□□□ -0.67
VBP1-203ENST00000535916 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
VBP1-203ENST00000535916 THBS1P07996 1170 aa10.84□□□□□ -0.67
VBP1-203ENST00000535916 RASSF7Q02833 373 aa10.84□□□□□ -0.67
VBP1-203ENST00000535916 WASHC4Q2M389 1173 aa10.84□□□□□ -0.67
VBP1-203ENST00000535916 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
VBP1-203ENST00000535916 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
VBP1-203ENST00000535916 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
VBP1-203ENST00000535916 GNASQ5JWF2 1037 aa10.83□□□□□ -0.68
VBP1-203ENST00000535916 TMEM214Q6NUQ4 689 aaKnown RBP10.83□□□□□ -0.68
VBP1-203ENST00000535916 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
VBP1-203ENST00000535916 MARSP56192 900 aaKnown RBP10.82□□□□□ -0.68
VBP1-203ENST00000535916 A0A1B0GTH6 734 aa10.81□□□□□ -0.68
VBP1-203ENST00000535916 TLR1Q15399 786 aa10.81□□□□□ -0.68
VBP1-203ENST00000535916 PLPP7Q8NBV4 271 aa10.81□□□□□ -0.68
VBP1-203ENST00000535916 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
VBP1-203ENST00000535916 SCNN1DP51172 638 aa10.8□□□□□ -0.68
VBP1-203ENST00000535916 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
VBP1-203ENST00000535916 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
VBP1-203ENST00000535916 MX2P20592 715 aa10.79□□□□□ -0.68
VBP1-203ENST00000535916 IRS1P35568 1242 aa10.79□□□□□ -0.68
VBP1-203ENST00000535916 ACDQ96AP0 544 aa10.79□□□□□ -0.68
VBP1-203ENST00000535916 MSX1P28360 303 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 SOX11P35716 441 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 GDF10P55107 478 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 MAP7D1Q3KQU3 841 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
VBP1-203ENST00000535916 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 RUBCNLQ9H714 662 aa10.78□□□□□ -0.68
VBP1-203ENST00000535916 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
VBP1-203ENST00000535916 INHAP05111 366 aa10.76□□□□□ -0.69
VBP1-203ENST00000535916 BCRP11274 1271 aa10.76□□□□□ -0.69
VBP1-203ENST00000535916 UBAP2LQ14157 1087 aaKnown RBP10.76□□□□□ -0.69
VBP1-203ENST00000535916 SCARF2Q96GP6 870 aaPredicted RBP10.76□□□□□ -0.69
VBP1-203ENST00000535916 KRTAP4-8Q9BYQ9 185 aa10.76□□□□□ -0.69
VBP1-203ENST00000535916 ENAMQ9NRM1 1142 aa10.76□□□□□ -0.69
VBP1-203ENST00000535916 CFHR5Q9BXR6 569 aa10.75□□□□□ -0.69
VBP1-203ENST00000535916 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
VBP1-203ENST00000535916 PLA2G4AP47712 749 aa10.74□□□□□ -0.69
VBP1-203ENST00000535916 GPAT2Q6NUI2 795 aa10.74□□□□□ -0.69
VBP1-203ENST00000535916 PGBD3Q8N328 593 aa10.74□□□□□ -0.69
VBP1-203ENST00000535916 POM121Q96HA1 1249 aa10.74□□□□□ -0.69
VBP1-203ENST00000535916 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
VBP1-203ENST00000535916 IGHA1P01876 353 aa10.73□□□□□ -0.69
VBP1-203ENST00000535916 LBRQ14739 615 aaKnown RBP10.73□□□□□ -0.69
VBP1-203ENST00000535916 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
VBP1-203ENST00000535916 TMEM229AB2RXF0 380 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 MAP2K3P46734 347 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 SMTNP53814 917 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 EFHC2Q5JST6 749 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 TBC1D9Q6ZT07 1266 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 NEDD1Q8NHV4 660 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 CNTNAP5Q8WYK1 1306 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 ALG2Q9H553 416 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 PHF24Q9UPV7 400 aa10.71□□□□□ -0.69
VBP1-203ENST00000535916 SKIP12755 728 aa10.7□□□□□ -0.7
VBP1-203ENST00000535916 OXCT2Q9BYC2 517 aaPredicted RBP10.7□□□□□ -0.7
VBP1-203ENST00000535916 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
VBP1-203ENST00000535916 OIP5O43482 229 aa10.69□□□□□ -0.7
VBP1-203ENST00000535916 KLRG1Q96E93 195 aa10.69□□□□□ -0.7
VBP1-203ENST00000535916 ABHD17AQ96GS6 310 aa10.69□□□□□ -0.7
VBP1-203ENST00000535916 NIFKQ9BYG3 293 aaKnown RBP10.69□□□□□ -0.7
VBP1-203ENST00000535916 PCDHGA11Q9Y5H2 935 aa10.69□□□□□ -0.7
VBP1-203ENST00000535916 DNMT3AQ9Y6K1 912 aaPredicted RBP10.69□□□□□ -0.7
VBP1-203ENST00000535916 ATP4AP20648 1035 aa10.68□□□□□ -0.7
VBP1-203ENST00000535916 EML3Q32P44 896 aa10.68□□□□□ -0.7
VBP1-203ENST00000535916 NDFIP2Q9NV92 336 aa10.68□□□□□ -0.7
VBP1-203ENST00000535916 ATXN7L1Q9ULK2 861 aaPredicted RBP10.68□□□□□ -0.7
VBP1-203ENST00000535916 USP3Q9Y6I4 520 aa10.68□□□□□ -0.7
VBP1-203ENST00000535916 BNIP3LO60238 219 aa10.67□□□□□ -0.7
VBP1-203ENST00000535916 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
VBP1-203ENST00000535916 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
VBP1-203ENST00000535916 SLC4A9Q96Q91 983 aa10.67□□□□□ -0.7
VBP1-203ENST00000535916 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
VBP1-203ENST00000535916 IQSEC3Q9UPP2 1182 aaPredicted RBP10.67□□□□□ -0.7
VBP1-203ENST00000535916 MTFR1Q15390 333 aa10.66□□□□□ -0.7
VBP1-203ENST00000535916 WWC1Q8IX03 1113 aa10.66□□□□□ -0.7
VBP1-203ENST00000535916 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
VBP1-203ENST00000535916 A6NJY4 79 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 PHF20L1A8MW92 1017 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 C2CD2LO14523 706 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 RAD21O60216 631 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 FGFR3P22607 806 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 GTF2IP78347 998 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 NCOA4Q13772 614 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
VBP1-203ENST00000535916 NFATC2IPQ8NCF5 419 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 NOD1Q9Y239 953 aa10.65□□□□□ -0.7
VBP1-203ENST00000535916 POM121CA8CG34 1229 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 SHISA8B8ZZ34 492 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 CDK2AP1O14519 115 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 BMP4P12644 408 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 CTBSQ01459 385 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 PODNQ7Z5L7 613 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 DEPDC4Q8N2C3 294 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 BEND7Q8N7W2 519 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms