RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 SDSP20132 328 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 CRB1P82279 1406 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
ATP2C1-224ENST00000533801 IP6K1Q92551 441 aa19.67■□□□□ 0.74
ATP2C1-224ENST00000533801 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
ATP2C1-224ENST00000533801 PI4KAP2A4QPH2 592 aa19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 SURF6O75683 361 aaKnown RBP19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 ATF3P18847 181 aa19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 PI4KAP1Q8N8J0 262 aa19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 TTC22Q5TAA0 569 aa19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 AXIN2Q9Y2T1 843 aa19.66■□□□□ 0.74
ATP2C1-224ENST00000533801 MYL6BP14649 208 aa19.65■□□□□ 0.74
ATP2C1-224ENST00000533801 JARID2Q92833 1246 aaPredicted RBP19.65■□□□□ 0.74
ATP2C1-224ENST00000533801 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.74
ATP2C1-224ENST00000533801 AKAP12Q02952 1782 aa19.64■□□□□ 0.73
ATP2C1-224ENST00000533801 SSH2Q76I76 1423 aa19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 KCNH5Q8NCM2 988 aa19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 SRGAP3O43295 1099 aa19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
ATP2C1-224ENST00000533801 GNAI3P08754 354 aa19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 FOXD4L6Q3SYB3 417 aaPredicted RBP19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 FOXD4L3Q6VB84 417 aaPredicted RBP19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 SRCIN1Q9C0H9 1055 aa19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 LRRCC1Q9C099 1032 aa19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 ANO2Q9NQ90 1003 aa19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 ZNF330Q9Y3S2 320 aaPredicted RBP19.62■□□□□ 0.73
ATP2C1-224ENST00000533801 A0A0G2JS52 829 aa19.61■□□□□ 0.73
ATP2C1-224ENST00000533801 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
ATP2C1-224ENST00000533801 NBPF7P0C2Y1 421 aaPredicted RBP19.61■□□□□ 0.73
ATP2C1-224ENST00000533801 ARHGAP23Q9P227 1491 aa19.61■□□□□ 0.73
ATP2C1-224ENST00000533801 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
ATP2C1-224ENST00000533801 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
ATP2C1-224ENST00000533801 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
ATP2C1-224ENST00000533801 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
ATP2C1-224ENST00000533801 ANTXR1Q9H6X2 564 aa19.6■□□□□ 0.73
ATP2C1-224ENST00000533801 SLIT1O75093 1534 aa19.59■□□□□ 0.73
ATP2C1-224ENST00000533801 CWF19L2Q2TBE0 894 aaKnown RBP19.59■□□□□ 0.73
ATP2C1-224ENST00000533801 PDE1AP54750 535 aa19.58■□□□□ 0.73
ATP2C1-224ENST00000533801 KDRP35968 1356 aa19.58■□□□□ 0.73
ATP2C1-224ENST00000533801 RGS12O14924 1447 aa19.58■□□□□ 0.73
ATP2C1-224ENST00000533801 USP44Q9H0E7 712 aa19.58■□□□□ 0.73
ATP2C1-224ENST00000533801 SIL1Q9H173 461 aa19.58■□□□□ 0.72
ATP2C1-224ENST00000533801 DTNBO60941 627 aa19.57■□□□□ 0.72
ATP2C1-224ENST00000533801 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
ATP2C1-224ENST00000533801 MCM4P33991 863 aa19.57■□□□□ 0.72
ATP2C1-224ENST00000533801 MX1P20591 662 aa19.56■□□□□ 0.72
ATP2C1-224ENST00000533801 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
ATP2C1-224ENST00000533801 DNAAF4Q8WXU2 420 aa19.56■□□□□ 0.72
ATP2C1-224ENST00000533801 MAP3K2Q9Y2U5 619 aa19.56■□□□□ 0.72
ATP2C1-224ENST00000533801 PA2G4Q9UQ80 394 aaKnown RBP19.56■□□□□ 0.72
ATP2C1-224ENST00000533801 RBM25P49756 843 aaKnown RBP19.55■□□□□ 0.72
ATP2C1-224ENST00000533801 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
ATP2C1-224ENST00000533801 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
ATP2C1-224ENST00000533801 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
ATP2C1-224ENST00000533801 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 RNMTO43148 476 aaKnown RBP19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 KIF2CQ99661 725 aa19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 UPF3BQ9BZI7 483 aaKnown RBP19.54■□□□□ 0.72
ATP2C1-224ENST00000533801 SSFA2P28290 1259 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 UNC5CLQ8IV45 518 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 NEK4P51957 841 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 TRAK2O60296 914 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 RIC3Q7Z5B4 369 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 TNPO1Q92973 898 aaKnown RBP19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 C19orf44Q9H6X5 657 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
ATP2C1-224ENST00000533801 DDX54Q8TDD1 881 aaKnown RBP19.52■□□□□ 0.72
ATP2C1-224ENST00000533801 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
ATP2C1-224ENST00000533801 CHAMP1Q96JM3 812 aa19.52■□□□□ 0.71
ATP2C1-224ENST00000533801 ERC2O15083 957 aa19.51■□□□□ 0.71
ATP2C1-224ENST00000533801 REC8O95072 547 aa19.51■□□□□ 0.71
ATP2C1-224ENST00000533801 CHMP3Q9Y3E7 222 aa19.51■□□□□ 0.71
ATP2C1-224ENST00000533801 USP26Q9BXU7 913 aa19.5■□□□□ 0.71
ATP2C1-224ENST00000533801 KLHDC4Q8TBB5 520 aa19.5■□□□□ 0.71
ATP2C1-224ENST00000533801 NRKQ7Z2Y5 1582 aa19.5■□□□□ 0.71
ATP2C1-224ENST00000533801 KAT6BQ8WYB5 2073 aa19.5■□□□□ 0.71
ATP2C1-224ENST00000533801 TATP17735 454 aaPredicted RBP19.49■□□□□ 0.71
ATP2C1-224ENST00000533801 TTC5Q8N0Z6 440 aa19.49■□□□□ 0.71
ATP2C1-224ENST00000533801 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
ATP2C1-224ENST00000533801 TOPAZ1Q8N9V7 1692 aa19.48■□□□□ 0.71
ATP2C1-224ENST00000533801 ZGPATQ8N5A5 531 aaKnown RBP19.48■□□□□ 0.71
ATP2C1-224ENST00000533801 AMOTQ4VCS5 1084 aa19.48■□□□□ 0.71
ATP2C1-224ENST00000533801 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
ATP2C1-224ENST00000533801 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
ATP2C1-224ENST00000533801 ST18O60284 1047 aa19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 PKP1Q13835 747 aa19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 TMEM94Q12767 1356 aa19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 ATP5J2-PTCD1G3V325 749 aa19.47■□□□□ 0.71
ATP2C1-224ENST00000533801 PTCD1O75127 700 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms