RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	SLC4A9	Q96Q91	983 aa		28.98	■■■□□ 2.23
FDFT1-220	ENST00000531733	HSPA5	P11021	654 aa	Known RBP	28.97	■■■□□ 2.23
FDFT1-220	ENST00000531733	PANK3	Q9H999	370 aa		28.97	■■■□□ 2.23
FDFT1-220	ENST00000531733	KDR	P35968	1356 aa		28.96	■■■□□ 2.23
FDFT1-220	ENST00000531733	CEP350	Q5VT06	3117 aa		28.96	■■■□□ 2.23
FDFT1-220	ENST00000531733	CLSPN	Q9HAW4	1339 aa		28.94	■■■□□ 2.22
FDFT1-220	ENST00000531733	ADCY9	O60503	1353 aa		28.92	■■■□□ 2.22
FDFT1-220	ENST00000531733	KDM6A	O15550	1401 aa	Predicted RBP	28.92	■■■□□ 2.22
FDFT1-220	ENST00000531733	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
FDFT1-220	ENST00000531733	AEBP1	Q8IUX7	1158 aa		28.9	■■■□□ 2.22
FDFT1-220	ENST00000531733	MMP10	P09238	476 aa		28.89	■■■□□ 2.22
FDFT1-220	ENST00000531733	RBM42	Q9BTD8	480 aa	Known RBP	28.89	■■■□□ 2.22
FDFT1-220	ENST00000531733	PLEKHG2	Q9H7P9	1386 aa		28.88	■■■□□ 2.21
FDFT1-220	ENST00000531733	ERVV-2	B6SEH9	535 aa		28.88	■■■□□ 2.21
FDFT1-220	ENST00000531733	COL5A3	P25940	1745 aa	Predicted RBP	28.88	■■■□□ 2.21
FDFT1-220	ENST00000531733	KIAA1551	Q9HCM1	1747 aa		28.87	■■■□□ 2.21
FDFT1-220	ENST00000531733	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.87	■■■□□ 2.21
FDFT1-220	ENST00000531733	DCAF5	Q96JK2	942 aa		28.87	■■■□□ 2.21
FDFT1-220	ENST00000531733	ZNF831	Q5JPB2	1677 aa		28.86	■■■□□ 2.21
FDFT1-220	ENST00000531733	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.86	■■■□□ 2.21
FDFT1-220	ENST00000531733	ZNF526	Q8TF50	670 aa	Predicted RBP	28.86	■■■□□ 2.21
FDFT1-220	ENST00000531733	CIC	Q96RK0	1608 aa	Predicted RBP	28.85	■■■□□ 2.21
FDFT1-220	ENST00000531733	TRAPPC3L	Q5T215	181 aa		28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	ARHGEF1	Q92888	912 aa	Known RBP	28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	RTCB	Q9Y3I0	505 aa	Known RBP	28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	KIF13B	Q9NQT8	1826 aa		28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	MYH14	Q7Z406	1995 aa	Known RBP	28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	PXDNL	A1KZ92	1463 aa		28.84	■■■□□ 2.21
FDFT1-220	ENST00000531733	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.83	■■■□□ 2.21
FDFT1-220	ENST00000531733	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.83	■■■□□ 2.21
FDFT1-220	ENST00000531733	HSP90AB1	P08238	724 aa	Known RBP	28.82	■■■□□ 2.2
FDFT1-220	ENST00000531733	MORC1	Q86VD1	984 aa		28.82	■■■□□ 2.2
FDFT1-220	ENST00000531733	CNTNAP4	Q9C0A0	1308 aa		28.81	■■■□□ 2.2
FDFT1-220	ENST00000531733	CABP4	P57796	275 aa		28.81	■■■□□ 2.2
FDFT1-220	ENST00000531733	AMOT	Q4VCS5	1084 aa		28.8	■■■□□ 2.2
FDFT1-220	ENST00000531733	RC3H1	Q5TC82	1133 aa	Known RBP	28.8	■■■□□ 2.2
FDFT1-220	ENST00000531733	GYS1	P13807	737 aa		28.79	■■■□□ 2.2
FDFT1-220	ENST00000531733	C4A	P0C0L4	1744 aa		28.79	■■■□□ 2.2
FDFT1-220	ENST00000531733	C10orf71	Q711Q0	1435 aa		28.78	■■■□□ 2.2
FDFT1-220	ENST00000531733	PTCD1	O75127	700 aa	Known RBP	28.78	■■■□□ 2.2
FDFT1-220	ENST00000531733	RPS6KA4	O75676	772 aa		28.78	■■■□□ 2.2
FDFT1-220	ENST00000531733	MTHFS	P49914	203 aa		28.78	■■■□□ 2.2
FDFT1-220	ENST00000531733	SULT6B1	Q6IMI4	303 aa		28.78	■■■□□ 2.2
FDFT1-220	ENST00000531733		A0A0G2JLW4	131 aa		28.77	■■■□□ 2.2
FDFT1-220	ENST00000531733	NLGN1	Q8N2Q7	840 aa		28.77	■■■□□ 2.2
FDFT1-220	ENST00000531733	NFATC2IP	Q8NCF5	419 aa		28.77	■■■□□ 2.2
FDFT1-220	ENST00000531733	IL13	P35225	146 aa		28.76	■■■□□ 2.19
FDFT1-220	ENST00000531733	ADRA2B	P18089	450 aa		28.75	■■■□□ 2.19
FDFT1-220	ENST00000531733	TJP1	Q07157	1748 aa		28.74	■■■□□ 2.19
FDFT1-220	ENST00000531733	RFC4	P35249	363 aa		28.74	■■■□□ 2.19
FDFT1-220	ENST00000531733	C1orf141	Q5JVX7	400 aa		28.74	■■■□□ 2.19
FDFT1-220	ENST00000531733	TGFB2	P61812	414 aa		28.73	■■■□□ 2.19
FDFT1-220	ENST00000531733	SRP68	Q9UHB9	627 aa	Known RBP	28.73	■■■□□ 2.19
FDFT1-220	ENST00000531733	DPEP1	P16444	411 aa		28.72	■■■□□ 2.19
FDFT1-220	ENST00000531733	CRKL	P46109	303 aa	Known RBP	28.72	■■■□□ 2.19
FDFT1-220	ENST00000531733	BCS1L	Q9Y276	419 aa		28.72	■■■□□ 2.19
FDFT1-220	ENST00000531733	SCN11A	Q9UI33	1791 aa		28.72	■■■□□ 2.19
FDFT1-220	ENST00000531733	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.71	■■■□□ 2.19
FDFT1-220	ENST00000531733	KNSTRN	Q9Y448	316 aa		28.71	■■■□□ 2.19
FDFT1-220	ENST00000531733	KIF3C	O14782	793 aa		28.7	■■■□□ 2.18
FDFT1-220	ENST00000531733	BRCA1	P38398	1863 aa	Known RBP	28.7	■■■□□ 2.18
FDFT1-220	ENST00000531733	CCDC87	Q9NVE4	849 aa		28.69	■■■□□ 2.18
FDFT1-220	ENST00000531733	CCER1	Q8TC90	406 aa	Predicted RBP	28.68	■■■□□ 2.18
FDFT1-220	ENST00000531733	PARP3	Q9Y6F1	533 aa		28.68	■■■□□ 2.18
FDFT1-220	ENST00000531733	ADAMTS7	Q9UKP4	1686 aa		28.67	■■■□□ 2.18
FDFT1-220	ENST00000531733	KCNA3	P22001	575 aa		28.67	■■■□□ 2.18
FDFT1-220	ENST00000531733	FKBP8	Q14318	412 aa		28.67	■■■□□ 2.18
FDFT1-220	ENST00000531733	LGR6	Q9HBX8	967 aa		28.67	■■■□□ 2.18
FDFT1-220	ENST00000531733	DDR1	Q08345	913 aa		28.66	■■■□□ 2.18
FDFT1-220	ENST00000531733	INTS5	Q6P9B9	1019 aa	Known RBP	28.66	■■■□□ 2.18
FDFT1-220	ENST00000531733	HSPA6	P17066	643 aa		28.65	■■■□□ 2.18
FDFT1-220	ENST00000531733	KIF7	Q2M1P5	1343 aa		28.65	■■■□□ 2.18
FDFT1-220	ENST00000531733	USP42	Q9H9J4	1324 aa	Known RBP	28.65	■■■□□ 2.18
FDFT1-220	ENST00000531733	AKAP4	Q5JQC9	854 aa		28.64	■■■□□ 2.18
FDFT1-220	ENST00000531733	ARHGAP27	Q6ZUM4	889 aa		28.64	■■■□□ 2.18
FDFT1-220	ENST00000531733	FCHSD2	O94868	740 aa		28.63	■■■□□ 2.17
FDFT1-220	ENST00000531733	HMOX1	P09601	288 aa		28.63	■■■□□ 2.17
FDFT1-220	ENST00000531733	DNAJC10	Q8IXB1	793 aa		28.63	■■■□□ 2.17
FDFT1-220	ENST00000531733	SLC52A2	Q9HAB3	445 aa		28.62	■■■□□ 2.17
FDFT1-220	ENST00000531733	SLC39A6	Q13433	755 aa		28.61	■■■□□ 2.17
FDFT1-220	ENST00000531733	VIRMA	Q69YN4	1812 aa	Known RBP	28.61	■■■□□ 2.17
FDFT1-220	ENST00000531733	MRC1	P22897	1456 aa		28.6	■■■□□ 2.17
FDFT1-220	ENST00000531733	RNMT	O43148	476 aa	Known RBP	28.59	■■■□□ 2.17
FDFT1-220	ENST00000531733	ARFGEF1	Q9Y6D6	1849 aa		28.59	■■■□□ 2.17
FDFT1-220	ENST00000531733	KCP	Q6ZWJ8	1503 aa		28.58	■■■□□ 2.17
FDFT1-220	ENST00000531733	POLRMT	O00411	1230 aa	Known RBP	28.57	■■■□□ 2.16
FDFT1-220	ENST00000531733	PER1	O15534	1290 aa	Predicted RBP	28.57	■■■□□ 2.16
FDFT1-220	ENST00000531733	MTHFSD	Q2M296	383 aa	Known RBP	28.57	■■■□□ 2.16
FDFT1-220	ENST00000531733	TM4SF1	P30408	202 aa		28.56	■■■□□ 2.16
FDFT1-220	ENST00000531733	CHRNA5	P30532	468 aa		28.56	■■■□□ 2.16
FDFT1-220	ENST00000531733	SOS1	Q07889	1333 aa	Predicted RBP	28.56	■■■□□ 2.16
FDFT1-220	ENST00000531733	USPL1	Q5W0Q7	1092 aa		28.56	■■■□□ 2.16
FDFT1-220	ENST00000531733	NMRK2	Q9NPI5	230 aa		28.56	■■■□□ 2.16
FDFT1-220	ENST00000531733	CYP19A1	P11511	503 aa	Predicted RBP	28.55	■■■□□ 2.16
FDFT1-220	ENST00000531733	CC2D1B	Q5T0F9	858 aa	Known RBP	28.54	■■■□□ 2.16
FDFT1-220	ENST00000531733	C9orf131	Q5VYM1	1079 aa		28.54	■■■□□ 2.16
FDFT1-220	ENST00000531733	PIM2	Q9P1W9	311 aa		28.54	■■■□□ 2.16
FDFT1-220	ENST00000531733	ZBTB1	Q9Y2K1	713 aa		28.52	■■■□□ 2.16
FDFT1-220	ENST00000531733	DALRD3	Q5D0E6	543 aa	Known RBP	28.51	■■■□□ 2.15
FDFT1-220	ENST00000531733	DIAPH1	O60610	1272 aa	Known RBP	28.5	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms