RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	ESCO1	Q5FWF5	840 aa		12.11	□□□□□ -0.47
PPP6R3-223	ENST00000531432	ESYT1	Q9BSJ8	1104 aa		12.11	□□□□□ -0.47
PPP6R3-223	ENST00000531432	ZNF358	Q9NW07	568 aa		12.1	□□□□□ -0.47
PPP6R3-223	ENST00000531432	TRIM47	Q96LD4	638 aa		12.09	□□□□□ -0.47
PPP6R3-223	ENST00000531432	NLRP3	Q96P20	1036 aa		12.09	□□□□□ -0.47
PPP6R3-223	ENST00000531432	ARX	Q96QS3	562 aa		12.09	□□□□□ -0.47
PPP6R3-223	ENST00000531432	SENP2	Q9HC62	589 aa		12.09	□□□□□ -0.47
PPP6R3-223	ENST00000531432	SERTAD1	Q9UHV2	236 aa		12.09	□□□□□ -0.47
PPP6R3-223	ENST00000531432	TTLL8	A6PVC2	850 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SFI1	A8K8P3	1242 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	ATG7	O95352	703 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	RNF144A	P50876	292 aa	Predicted RBP	12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	DPYD	Q12882	1025 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	ANKMY2	Q8IV38	441 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	RNF217	Q8TC41	542 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	ZMIZ1	Q9ULJ6	1067 aa		12.08	□□□□□ -0.48
PPP6R3-223	ENST00000531432	FIGNL2	A6NMB9	653 aa		12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SOBP	A7XYQ1	873 aa		12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	CENPC	Q03188	943 aa		12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	DNMT3L	Q9UJW3	386 aa		12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	NOVA2	Q9UNW9	492 aa	Known RBP	12.07	□□□□□ -0.48
PPP6R3-223	ENST00000531432	PPP1R15A	O75807	674 aa	Predicted RBP	12.06	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SNRPB	P14678	240 aa	Known RBP	12.06	□□□□□ -0.48
PPP6R3-223	ENST00000531432	GPC1	P35052	558 aa		12.06	□□□□□ -0.48
PPP6R3-223	ENST00000531432	KIFC2	Q96AC6	838 aa		12.06	□□□□□ -0.48
PPP6R3-223	ENST00000531432	ELOA	Q14241	798 aa	Known RBP	12.05	□□□□□ -0.48
PPP6R3-223	ENST00000531432	TLR1	Q15399	786 aa		12.05	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SLC4A9	Q96Q91	983 aa		12.05	□□□□□ -0.48
PPP6R3-223	ENST00000531432	GRIP2	Q9C0E4	1043 aa		12.05	□□□□□ -0.48
PPP6R3-223	ENST00000531432	C11orf95	C9JLR9	678 aa	Predicted RBP	12.04	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SMTN	P53814	917 aa		12.04	□□□□□ -0.48
PPP6R3-223	ENST00000531432	SEC13	P55735	322 aa		12.04	□□□□□ -0.48
PPP6R3-223	ENST00000531432	STK32A	Q8WU08	396 aa		12.03	□□□□□ -0.48
PPP6R3-223	ENST00000531432	RBM19	Q9Y4C8	960 aa	Known RBP	12.03	□□□□□ -0.48
PPP6R3-223	ENST00000531432	BACH1	O14867	736 aa		12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	EPHA4	P54764	986 aa		12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	SLC27A3	Q5K4L6	730 aa		12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	TNS4	Q8IZW8	715 aa		12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	TSEN2	Q8NCE0	465 aa	Known RBP	12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	FAM200A	Q8TCP9	573 aa		12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.02	□□□□□ -0.49
PPP6R3-223	ENST00000531432		A6NJY4	79 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432		M0R2N6	131 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432	MAN1A2	O60476	641 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432	MTFR1	Q15390	333 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432	PRICKLE2	Q7Z3G6	844 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432	USP3	Q9Y6I4	520 aa		12.01	□□□□□ -0.49
PPP6R3-223	ENST00000531432	LYSMD3	Q7Z3D4	306 aa		12	□□□□□ -0.49
PPP6R3-223	ENST00000531432	LGR5	O75473	907 aa		11.99	□□□□□ -0.49
PPP6R3-223	ENST00000531432	TMEM164	Q5U3C3	297 aa		11.99	□□□□□ -0.49
PPP6R3-223	ENST00000531432	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP6R3-223	ENST00000531432	RHOQ	P17081	205 aa		11.98	□□□□□ -0.49
PPP6R3-223	ENST00000531432	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.98	□□□□□ -0.49	5e-6	■■□□□ 11.7
PPP6R3-223	ENST00000531432	ZNF787	Q6DD87	383 aa		11.98	□□□□□ -0.49
PPP6R3-223	ENST00000531432	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.98	□□□□□ -0.49
PPP6R3-223	ENST00000531432	SPATA31C2	B4DYI2	1134 aa		11.97	□□□□□ -0.49
PPP6R3-223	ENST00000531432	FOXK2	Q01167	660 aa		11.97	□□□□□ -0.49
PPP6R3-223	ENST00000531432	POU4F2	Q12837	409 aa		11.97	□□□□□ -0.49
PPP6R3-223	ENST00000531432	TMEM214	Q6NUQ4	689 aa	Known RBP	11.97	□□□□□ -0.49
PPP6R3-223	ENST00000531432	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.97	□□□□□ -0.49
PPP6R3-223	ENST00000531432	ACIN1	Q9UKV3	1341 aa	Known RBP	11.96	□□□□□ -0.49
PPP6R3-223	ENST00000531432	CDK2AP1	O14519	115 aa		11.96	□□□□□ -0.49
PPP6R3-223	ENST00000531432	FAM69C	Q0P6D2	419 aa		11.96	□□□□□ -0.49
PPP6R3-223	ENST00000531432	TBCEL	Q5QJ74	424 aa		11.96	□□□□□ -0.49
PPP6R3-223	ENST00000531432	ZNF295-AS1	Q8N0V1	137 aa		11.96	□□□□□ -0.49
PPP6R3-223	ENST00000531432	SLC9A9	Q8IVB4	645 aa		11.95	□□□□□ -0.5
PPP6R3-223	ENST00000531432	RHBDD1	Q8TEB9	315 aa		11.95	□□□□□ -0.5
PPP6R3-223	ENST00000531432	HINFP	Q9BQA5	517 aa		11.95	□□□□□ -0.5
PPP6R3-223	ENST00000531432	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.95	□□□□□ -0.5
PPP6R3-223	ENST00000531432	C4orf17	Q53FE4	359 aa		11.94	□□□□□ -0.5
PPP6R3-223	ENST00000531432	NBPF10	Q6P3W6	841 aa	Known RBP	11.94	□□□□□ -0.5
PPP6R3-223	ENST00000531432	NBPF15	Q8N660	670 aa		11.94	□□□□□ -0.5
PPP6R3-223	ENST00000531432	GTF2E1	P29083	439 aa	Predicted RBP	11.93	□□□□□ -0.5
PPP6R3-223	ENST00000531432	PHKA2	P46019	1235 aa		11.93	□□□□□ -0.5
PPP6R3-223	ENST00000531432	GNAS	Q5JWF2	1037 aa		11.93	□□□□□ -0.5
PPP6R3-223	ENST00000531432	TAS1R3	Q7RTX0	852 aa		11.93	□□□□□ -0.5
PPP6R3-223	ENST00000531432	SENP3-EIF4A1	A0A087X0R7	540 aa		11.92	□□□□□ -0.5
PPP6R3-223	ENST00000531432	CARNS1	A5YM72	827 aa		11.92	□□□□□ -0.5
PPP6R3-223	ENST00000531432	TMEM88B	A6NKF7	163 aa		11.92	□□□□□ -0.5
PPP6R3-223	ENST00000531432	C21orf2	O43822	256 aa		11.92	□□□□□ -0.5
PPP6R3-223	ENST00000531432	PTS	Q03393	145 aa		11.92	□□□□□ -0.5
PPP6R3-223	ENST00000531432	CSB-PGBD3	P0DP91	1061 aa		11.91	□□□□□ -0.5
PPP6R3-223	ENST00000531432	SWI5	Q1ZZU3	235 aa		11.91	□□□□□ -0.5
PPP6R3-223	ENST00000531432	RETREG2	Q8NC44	543 aa		11.91	□□□□□ -0.5
PPP6R3-223	ENST00000531432	GAS2L2	Q8NHY3	880 aa		11.91	□□□□□ -0.5
PPP6R3-223	ENST00000531432	SLAIN2	Q9P270	581 aa		11.91	□□□□□ -0.5
PPP6R3-223	ENST00000531432	ZDHHC1	Q8WTX9	485 aa		11.9	□□□□□ -0.5
PPP6R3-223	ENST00000531432	NIFK	Q9BYG3	293 aa	Known RBP	11.9	□□□□□ -0.5
PPP6R3-223	ENST00000531432	CABP1	Q9NZU7	370 aa		11.9	□□□□□ -0.5
PPP6R3-223	ENST00000531432	SLC35F4	A4IF30	521 aa		11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	PLA2G4A	P47712	749 aa		11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	WDR44	Q5JSH3	913 aa		11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	SCG3	Q8WXD2	468 aa	Known RBP	11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	PARP3	Q9Y6F1	533 aa		11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	ATAD2	Q6PL18	1390 aa		11.89	□□□□□ -0.51
PPP6R3-223	ENST00000531432	SH3PXD2A	Q5TCZ1	1133 aa		11.88	□□□□□ -0.51
PPP6R3-223	ENST00000531432	PRIMPOL	Q96LW4	560 aa		11.88	□□□□□ -0.51
PPP6R3-223	ENST00000531432	TIMMDC1	Q9NPL8	285 aa		11.88	□□□□□ -0.51
PPP6R3-223	ENST00000531432	PPP1R12B	O60237	982 aa	Predicted RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms