RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 IQUBQ8NA54 791 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
CSDE1-214ENST00000530886 POLKQ9UBT6 870 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 RPAP1Q9BWH6 1393 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-214ENST00000530886 ARHGAP5Q13017 1502 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 EFCAB6Q5THR3 1501 aa9.74□□□□□ -0.85
CSDE1-214ENST00000530886 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 AP5Z1O43299 807 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 FBXO38Q6PIJ6 1188 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.73□□□□□ -0.85
CSDE1-214ENST00000530886 UBXN6Q9BZV1 441 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 CAMSAP1Q5T5Y3 1602 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 LOC102724159A0A0B4J2E5 919 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 TNNT1P13805 278 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 EXOSC9Q06265 439 aaKnown RBP9.73□□□□□ -0.85
CSDE1-214ENST00000530886 PWP2Q15269 919 aaKnown RBP9.73□□□□□ -0.85
CSDE1-214ENST00000530886 CD163L1Q9NR16 1453 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 RGS12O14924 1447 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 AATKQ6ZMQ8 1374 aa9.73□□□□□ -0.85
CSDE1-214ENST00000530886 FRMPD1Q5SYB0 1578 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 PNPLA6Q8IY17 1366 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 ABCC4O15439 1325 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 ERBB3P21860 1342 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 APPP05067 770 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 HCLS1P14317 486 aaPredicted RBP9.72□□□□□ -0.85
CSDE1-214ENST00000530886 DHX37Q8IY37 1157 aaKnown RBP9.72□□□□□ -0.85
CSDE1-214ENST00000530886 CCDC171Q6TFL3 1326 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 MYO1CO00159 1063 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 ATP8B1O43520 1251 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
CSDE1-214ENST00000530886 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 FHOD1Q9Y613 1164 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 V9GYY5 206 aaPredicted RBP9.72□□□□□ -0.85
CSDE1-214ENST00000530886 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
CSDE1-214ENST00000530886 ALDH1L2Q3SY69 923 aa9.72□□□□□ -0.85
CSDE1-214ENST00000530886 RTL1A6NKG5 1358 aa9.71□□□□□ -0.85
CSDE1-214ENST00000530886 NSD2O96028 1365 aa9.71□□□□□ -0.85
CSDE1-214ENST00000530886 CHD2O14647 1828 aaKnown RBP9.71□□□□□ -0.85
CSDE1-214ENST00000530886 CWC15Q9P013 229 aaKnown RBP9.71□□□□□ -0.85
CSDE1-214ENST00000530886 KCNG1Q9UIX4 513 aa9.71□□□□□ -0.85
CSDE1-214ENST00000530886 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.86
CSDE1-214ENST00000530886 LMOD3Q0VAK6 560 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 USP48Q86UV5 1035 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 PSD3Q9NYI0 1048 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 CEP83Q9Y592 693 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.86
CSDE1-214ENST00000530886 CCDC172P0C7W6 258 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 TPM4P67936 248 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-214ENST00000530886 PLEKHG2Q9H7P9 1386 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
CSDE1-214ENST00000530886 GADD45BO75293 160 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-214ENST00000530886 UBE2HP62256 183 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 TTC22Q5TAA0 569 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 SYT10Q6XYQ8 523 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 MPNDQ8N594 471 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 SWT1Q5T5J6 900 aaKnown RBP9.7□□□□□ -0.86
CSDE1-214ENST00000530886 ANKRD45Q5TZF3 282 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 ELP1O95163 1332 aa9.7□□□□□ -0.86
CSDE1-214ENST00000530886 MAP2P11137 1827 aaKnown RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 MYH15Q9Y2K3 1946 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 KIF1CO43896 1103 aaKnown RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 GSCP56915 257 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 SRLQ86TD4 932 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 GOLGA6L1Q8N7Z2 621 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ARAP3Q8WWN8 1544 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ZRANB2O95218 330 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 PTGS1P23219 599 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 CDC25BP30305 580 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 PLA2G4AP47712 749 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 MTHFSP49914 203 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 SUGP1Q8IWZ8 645 aaKnown RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ZNF215Q9UL58 517 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-214ENST00000530886 KIF24Q5T7B8 1368 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 SIGLEC1Q9BZZ2 1709 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 A0A1B0GUL7 405 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ZSCAN25Q6NSZ9 544 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
CSDE1-214ENST00000530886 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 NEMFO60524 1076 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 SLU7O95391 586 aaKnown RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 TMPOP42166 694 aaKnown RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 TSGA10IPQ3SY00 556 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 PLA2G4DQ86XP0 818 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 ARHGAP45Q92619 1136 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms