RNA–Protein interactions for RNA: ENST00000528978.5

AP003557.1-202, humanhuman

TSL 4 BASIC

Gene AP003557.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-202ENST00000528978 USP17L22D6RA61 530 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 USP17L17D6RBQ6 530 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 INHAP05111 366 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 USP17L24Q0WX57 530 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 TPCN2Q8NHX9 752 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 FHDC1Q9C0D6 1143 aaPredicted RBP8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
AP003557.1-202ENST00000528978 EIF4G1Q04637 1599 aaKnown RBP8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 TTLL8A6PVC2 850 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 ZNF358Q9NW07 568 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 USP3Q9Y6I4 520 aa8.88□□□□□ -0.99
AP003557.1-202ENST00000528978 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 RNF144AP50876 292 aaPredicted RBP8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 CENPCQ03188 943 aa8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 PSME1Q06323 249 aa8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 SIX5Q8N196 739 aa8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
AP003557.1-202ENST00000528978 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 WASLO00401 505 aaPredicted RBP8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 LGR5O75473 907 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 LARGE2Q8N3Y3 721 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 CC2D2AQ9P2K1 1620 aa8.86□□□□□ -0.99
AP003557.1-202ENST00000528978 CECR2Q9BXF3 1484 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 DPYDQ12882 1025 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 PBXIP1Q96AQ6 731 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
AP003557.1-202ENST00000528978 EPHA4P54764 986 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 LARP1Q6PKG0 1096 aaKnown RBP8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 PRICKLE2Q7Z3G6 844 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 TNS4Q8IZW8 715 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
AP003557.1-202ENST00000528978 RHOQP17081 205 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 GPC1P35052 558 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 SMTNP53814 917 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
AP003557.1-202ENST00000528978 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
AP003557.1-202ENST00000528978 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
AP003557.1-202ENST00000528978 MAN1A2O60476 641 aa8.82□□□□□ -1
AP003557.1-202ENST00000528978 ATG7O95352 703 aa8.82□□□□□ -1
AP003557.1-202ENST00000528978 POU4F2Q12837 409 aa8.82□□□□□ -1
AP003557.1-202ENST00000528978 TLR1Q15399 786 aa8.82□□□□□ -1
AP003557.1-202ENST00000528978 TBCELQ5QJ74 424 aa8.82□□□□□ -1
AP003557.1-202ENST00000528978 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
AP003557.1-202ENST00000528978 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
AP003557.1-202ENST00000528978 MTFR1Q15390 333 aa8.81□□□□□ -1
AP003557.1-202ENST00000528978 CARNS1A5YM72 827 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 A6NJY4 79 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 LYSMD3Q7Z3D4 306 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
AP003557.1-202ENST00000528978 SLAIN2Q9P270 581 aa8.8□□□□□ -1
AP003557.1-202ENST00000528978 SEC13P55735 322 aa8.79□□□□□ -1
AP003557.1-202ENST00000528978 FOXK2Q01167 660 aa8.79□□□□□ -1
AP003557.1-202ENST00000528978 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
AP003557.1-202ENST00000528978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.79□□□□□ -1
AP003557.1-202ENST00000528978 C4orf17Q53FE4 359 aa8.79□□□□□ -1
AP003557.1-202ENST00000528978 PPARGC1BQ86YN6 1023 aaKnown RBP8.79□□□□□ -1
AP003557.1-202ENST00000528978 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 C21orf2O43822 256 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 PHKA2P46019 1235 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 PTSQ03393 145 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 TMEM164Q5U3C3 297 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
AP003557.1-202ENST00000528978 NBPF15Q8N660 670 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
AP003557.1-202ENST00000528978 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
AP003557.1-202ENST00000528978 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
AP003557.1-202ENST00000528978 M0R2N6 131 aa8.77□□□□□ -1.01
AP003557.1-202ENST00000528978 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
AP003557.1-202ENST00000528978 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
AP003557.1-202ENST00000528978 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
AP003557.1-202ENST00000528978 ZDHHC1Q8WTX9 485 aa8.77□□□□□ -1.01
AP003557.1-202ENST00000528978 SLC35F4A4IF30 521 aa8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 BACH1O14867 736 aa8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 VEGFBP49765 207 aa8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 TMEM214Q6NUQ4 689 aaKnown RBP8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 FAM200AQ8TCP9 573 aa8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
AP003557.1-202ENST00000528978 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
AP003557.1-202ENST00000528978 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
AP003557.1-202ENST00000528978 LCE2CQ5TA81 110 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms