RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 KIF7Q2M1P5 1343 aa17.25■□□□□ 0.35
TOP1MT-217ENST00000523417 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
TOP1MT-217ENST00000523417 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
TOP1MT-217ENST00000523417 C5P01031 1676 aa17.25■□□□□ 0.35
TOP1MT-217ENST00000523417 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
TOP1MT-217ENST00000523417 SLC4A9Q96Q91 983 aa17.24■□□□□ 0.35
TOP1MT-217ENST00000523417 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
TOP1MT-217ENST00000523417 TAF1LQ8IZX4 1826 aa17.24■□□□□ 0.35
TOP1MT-217ENST00000523417 MTHFSP49914 203 aa17.23■□□□□ 0.35
TOP1MT-217ENST00000523417 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
TOP1MT-217ENST00000523417 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
TOP1MT-217ENST00000523417 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.357e-8■□□□□ 10.1
TOP1MT-217ENST00000523417 CABP4P57796 275 aa17.22■□□□□ 0.35
TOP1MT-217ENST00000523417 GNPATO15228 680 aa17.21■□□□□ 0.35
TOP1MT-217ENST00000523417 PHF14O94880 888 aa17.21■□□□□ 0.35
TOP1MT-217ENST00000523417 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
TOP1MT-217ENST00000523417 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
TOP1MT-217ENST00000523417 UTRNP46939 3433 aa17.21■□□□□ 0.34
TOP1MT-217ENST00000523417 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
TOP1MT-217ENST00000523417 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
TOP1MT-217ENST00000523417 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
TOP1MT-217ENST00000523417 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
TOP1MT-217ENST00000523417 CHD4Q14839 1912 aa17.19■□□□□ 0.34
TOP1MT-217ENST00000523417 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
TOP1MT-217ENST00000523417 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
TOP1MT-217ENST00000523417 ARHGEF1Q92888 912 aaKnown RBP17.18■□□□□ 0.34
TOP1MT-217ENST00000523417 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
TOP1MT-217ENST00000523417 TGFB2P61812 414 aa17.15■□□□□ 0.34
TOP1MT-217ENST00000523417 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
TOP1MT-217ENST00000523417 MMP10P09238 476 aa17.14■□□□□ 0.33
TOP1MT-217ENST00000523417 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
TOP1MT-217ENST00000523417 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
TOP1MT-217ENST00000523417 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
TOP1MT-217ENST00000523417 GYS1P13807 737 aa17.13■□□□□ 0.33
TOP1MT-217ENST00000523417 RFC4P35249 363 aa17.13■□□□□ 0.33
TOP1MT-217ENST00000523417 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
TOP1MT-217ENST00000523417 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
TOP1MT-217ENST00000523417 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-217ENST00000523417 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-217ENST00000523417 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-217ENST00000523417 HMOX1P09601 288 aa17.1■□□□□ 0.33
TOP1MT-217ENST00000523417 INTS5Q6P9B9 1019 aaKnown RBP17.1■□□□□ 0.33
TOP1MT-217ENST00000523417 VSIG10Q8N0Z9 540 aa17.09■□□□□ 0.33
TOP1MT-217ENST00000523417 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
TOP1MT-217ENST00000523417 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
TOP1MT-217ENST00000523417 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
TOP1MT-217ENST00000523417 ADCY9O60503 1353 aa17.06■□□□□ 0.32
TOP1MT-217ENST00000523417 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
TOP1MT-217ENST00000523417 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
TOP1MT-217ENST00000523417 TM4SF1P30408 202 aa17.06■□□□□ 0.32
TOP1MT-217ENST00000523417 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
TOP1MT-217ENST00000523417 COL5A3P25940 1745 aaPredicted RBP17.05■□□□□ 0.32
TOP1MT-217ENST00000523417 GOLGB1Q14789 3259 aaKnown RBP17.05■□□□□ 0.32
TOP1MT-217ENST00000523417 MRC1P22897 1456 aa17.05■□□□□ 0.32
TOP1MT-217ENST00000523417 C10orf71Q711Q0 1435 aa17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 KCNA3P22001 575 aa17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
TOP1MT-217ENST00000523417 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 FKBP8Q14318 412 aa17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
TOP1MT-217ENST00000523417 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
TOP1MT-217ENST00000523417 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
TOP1MT-217ENST00000523417 DPEP1P16444 411 aa17.02■□□□□ 0.32
TOP1MT-217ENST00000523417 NARFQ9UHQ1 456 aa17.02■□□□□ 0.32
TOP1MT-217ENST00000523417 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
TOP1MT-217ENST00000523417 ZPR1O75312 459 aa17.01■□□□□ 0.31
TOP1MT-217ENST00000523417 DDR1Q08345 913 aa17.01■□□□□ 0.31
TOP1MT-217ENST00000523417 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
TOP1MT-217ENST00000523417 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
TOP1MT-217ENST00000523417 KIF13BQ9NQT8 1826 aa17■□□□□ 0.31
TOP1MT-217ENST00000523417 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
TOP1MT-217ENST00000523417 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
TOP1MT-217ENST00000523417 STARD3NLO95772 234 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 USPL1Q5W0Q7 1092 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 PIM2Q9P1W9 311 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
TOP1MT-217ENST00000523417 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
TOP1MT-217ENST00000523417 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms