RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.3
VIRMA-208ENST00000523263 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
VIRMA-208ENST00000523263 MAP2P11137 1827 aaKnown RBP13.19□□□□□ -0.3
VIRMA-208ENST00000523263 PHKG2P15735 406 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
VIRMA-208ENST00000523263 EMILIN1Q9Y6C2 1016 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 C10orf71Q711Q0 1435 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
VIRMA-208ENST00000523263 FSTL1Q12841 308 aa13.18□□□□□ -0.3
VIRMA-208ENST00000523263 EYA1Q99502 592 aa13.18□□□□□ -0.3
VIRMA-208ENST00000523263 KDRP35968 1356 aa13.18□□□□□ -0.3
VIRMA-208ENST00000523263 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
VIRMA-208ENST00000523263 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
VIRMA-208ENST00000523263 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 GYS1P13807 737 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 DPEP1P16444 411 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 KCNA3P22001 575 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 ITGB4P16144 1822 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
VIRMA-208ENST00000523263 FCHSD2O94868 740 aa13.15□□□□□ -0.3
VIRMA-208ENST00000523263 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
VIRMA-208ENST00000523263 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
VIRMA-208ENST00000523263 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
VIRMA-208ENST00000523263 RFC4P35249 363 aa13.14□□□□□ -0.31
VIRMA-208ENST00000523263 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
VIRMA-208ENST00000523263 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
VIRMA-208ENST00000523263 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
VIRMA-208ENST00000523263 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
VIRMA-208ENST00000523263 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
VIRMA-208ENST00000523263 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
VIRMA-208ENST00000523263 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
VIRMA-208ENST00000523263 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
VIRMA-208ENST00000523263 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
VIRMA-208ENST00000523263 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
VIRMA-208ENST00000523263 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
VIRMA-208ENST00000523263 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
VIRMA-208ENST00000523263 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
VIRMA-208ENST00000523263 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
VIRMA-208ENST00000523263 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
VIRMA-208ENST00000523263 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
VIRMA-208ENST00000523263 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
VIRMA-208ENST00000523263 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
VIRMA-208ENST00000523263 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
VIRMA-208ENST00000523263 TM4SF1P30408 202 aa13.08□□□□□ -0.32
VIRMA-208ENST00000523263 CABP4P57796 275 aa13.08□□□□□ -0.32
VIRMA-208ENST00000523263 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
VIRMA-208ENST00000523263 RNF181Q9P0P0 153 aa13.08□□□□□ -0.32
VIRMA-208ENST00000523263 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
VIRMA-208ENST00000523263 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
VIRMA-208ENST00000523263 PRELPP51888 382 aa13.07□□□□□ -0.32
VIRMA-208ENST00000523263 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
VIRMA-208ENST00000523263 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
VIRMA-208ENST00000523263 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
VIRMA-208ENST00000523263 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
VIRMA-208ENST00000523263 HTRA3P83110 453 aa13.06□□□□□ -0.32
VIRMA-208ENST00000523263 DDR1Q08345 913 aa13.06□□□□□ -0.32
VIRMA-208ENST00000523263 FKBP8Q14318 412 aa13.06□□□□□ -0.32
VIRMA-208ENST00000523263 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
VIRMA-208ENST00000523263 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
VIRMA-208ENST00000523263 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
VIRMA-208ENST00000523263 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
VIRMA-208ENST00000523263 VEGFAP15692 232 aaPredicted RBP13.04□□□□□ -0.32
VIRMA-208ENST00000523263 MTHFSP49914 203 aa13.04□□□□□ -0.32
VIRMA-208ENST00000523263 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
VIRMA-208ENST00000523263 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
VIRMA-208ENST00000523263 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
VIRMA-208ENST00000523263 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
VIRMA-208ENST00000523263 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
VIRMA-208ENST00000523263 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
VIRMA-208ENST00000523263 LMNB1P20700 586 aa13.03□□□□□ -0.32
VIRMA-208ENST00000523263 CHRNA5P30532 468 aa13.03□□□□□ -0.32
VIRMA-208ENST00000523263 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
VIRMA-208ENST00000523263 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
VIRMA-208ENST00000523263 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.33
VIRMA-208ENST00000523263 ZPR1O75312 459 aa13.01□□□□□ -0.33
VIRMA-208ENST00000523263 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
VIRMA-208ENST00000523263 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
VIRMA-208ENST00000523263 NARFQ9UHQ1 456 aa13□□□□□ -0.33
VIRMA-208ENST00000523263 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
VIRMA-208ENST00000523263 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
VIRMA-208ENST00000523263 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
VIRMA-208ENST00000523263 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
VIRMA-208ENST00000523263 TTLL6Q8N841 843 aa12.99□□□□□ -0.33
VIRMA-208ENST00000523263 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
VIRMA-208ENST00000523263 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
VIRMA-208ENST00000523263 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
VIRMA-208ENST00000523263 NFIXQ14938 502 aa12.98□□□□□ -0.33
VIRMA-208ENST00000523263 POTECB2RU33 542 aa12.97□□□□□ -0.33
VIRMA-208ENST00000523263 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms