RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, human

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1A1-208	ENST00000523203	GNPAT	O15228	680 aa		14.05	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	ITPK1	Q13572	414 aa		14.04	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	PANK3	Q9H999	370 aa		14.04	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	ATG3	Q9NT62	314 aa		14.04	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	ERVV-2	B6SEH9	535 aa		14.03	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	HSP90AB1	P08238	724 aa	Known RBP	14.03	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	PLEKHO1	Q53GL0	409 aa	Predicted RBP	14.03	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	IGSF1	Q8N6C5	1336 aa		14.03	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	PLEKHG2	Q9H7P9	1386 aa		14.03	□□□□□ -0.16
CSNK1A1-208	ENST00000523203	RBM42	Q9BTD8	480 aa	Known RBP	14.02	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ATP10D	Q9P241	1426 aa		14.01	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	DCAF5	Q96JK2	942 aa		14.01	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	WWC3	Q9ULE0	1092 aa		14.01	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	RTCB	Q9Y3I0	505 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	MMP10	P09238	476 aa		14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	AMOT	Q4VCS5	1084 aa		14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	TRAPPC3L	Q5T215	181 aa		14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ZNF530	Q6P9A1	599 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	MORC1	Q86VD1	984 aa		14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	GPBP1L1	Q9HC44	474 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	CEP350	Q5VT06	3117 aa		14	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	CABP4	P57796	275 aa		13.99	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	RC3H1	Q5TC82	1133 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ZNF831	Q5JPB2	1677 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ADRA2B	P18089	450 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	MTHFS	P49914	203 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	C1orf141	Q5JVX7	400 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	NLGN1	Q8N2Q7	840 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	SLC4A9	Q96Q91	983 aa		13.98	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	KDR	P35968	1356 aa		13.97	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ZNF526	Q8TF50	670 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	ARHGEF1	Q92888	912 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	KNSTRN	Q9Y448	316 aa		13.97	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	COL5A3	P25940	1745 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	RFC4	P35249	363 aa		13.96	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	AEBP1	Q8IUX7	1158 aa		13.96	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	KIF13B	Q9NQT8	1826 aa		13.96	□□□□□ -0.17
CSNK1A1-208	ENST00000523203	MYH14	Q7Z406	1995 aa	Known RBP	13.96	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.96	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	ADCY9	O60503	1353 aa		13.96	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	CNTNAP4	Q9C0A0	1308 aa		13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	PTCD1	O75127	700 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	RPS6KA4	O75676	772 aa		13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	TGFB2	P61812	414 aa		13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	SULT6B1	Q6IMI4	303 aa		13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	KDM6A	O15550	1401 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	CIC	Q96RK0	1608 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	NFATC2IP	Q8NCF5	419 aa		13.94	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	CCDC87	Q9NVE4	849 aa		13.94	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	PARP3	Q9Y6F1	533 aa		13.94	□□□□□ -0.18
CSNK1A1-208	ENST00000523203		A0A0G2JLW4	131 aa		13.93	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	GYS1	P13807	737 aa		13.93	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	BCS1L	Q9Y276	419 aa		13.93	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	PXDNL	A1KZ92	1463 aa		13.93	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	SCN11A	Q9UI33	1791 aa		13.92	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.92	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	IL13	P35225	146 aa		13.92	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	CRKL	P46109	303 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	C4A	P0C0L4	1744 aa		13.92	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	KIAA1551	Q9HCM1	1747 aa		13.91	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	C10orf71	Q711Q0	1435 aa		13.9	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	FCHSD2	O94868	740 aa		13.9	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	DPEP1	P16444	411 aa		13.9	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	AKAP4	Q5JQC9	854 aa		13.9	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	ARHGAP27	Q6ZUM4	889 aa		13.9	□□□□□ -0.18
CSNK1A1-208	ENST00000523203	HSPA6	P17066	643 aa		13.89	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	SRP68	Q9UHB9	627 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	BRCA1	P38398	1863 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	VIRMA	Q69YN4	1812 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	TJP1	Q07157	1748 aa		13.88	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	DDX10	Q13206	875 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	SLC52A2	Q9HAB3	445 aa		13.88	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	KIF3C	O14782	793 aa		13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	PER1	O15534	1290 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	CNGB1	Q14028	1251 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	LGR6	Q9HBX8	967 aa		13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	ARFGEF1	Q9Y6D6	1849 aa		13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	USP42	Q9H9J4	1324 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	RNMT	O43148	476 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	ZPR1	O75312	459 aa		13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	HMOX1	P09601	288 aa		13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	KCNA3	P22001	575 aa		13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	INTS5	Q6P9B9	1019 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	DNAJC10	Q8IXB1	793 aa		13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	PIM2	Q9P1W9	311 aa		13.86	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	DDR1	Q08345	913 aa		13.85	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	DIAPH1	O60610	1272 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	SLC39A6	Q13433	755 aa		13.84	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	DALRD3	Q5D0E6	543 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1A1-208	ENST00000523203	CYP19A1	P11511	503 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	TM4SF1	P30408	202 aa		13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	CC2D1B	Q5T0F9	858 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	C9orf131	Q5VYM1	1079 aa		13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	USPL1	Q5W0Q7	1092 aa		13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	SOS1	Q07889	1333 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	POLRMT	O00411	1230 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	TOMM70	O94826	608 aa		13.82	□□□□□ -0.2
CSNK1A1-208	ENST00000523203	MTHFSD	Q2M296	383 aa	Known RBP	13.82	□□□□□ -0.2

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