RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 SERTAD1Q9UHV2 236 aa8.96□□□□□ -0.98
HMGB1P1-201ENST00000522557 TMEM229AB2RXF0 380 aa8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 PHKA2P46019 1235 aa8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 GTF2IP78347 998 aa8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 CALR3Q96L12 384 aaKnown RBP8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 TFIP11Q9UBB9 837 aaKnown RBP8.95□□□□□ -0.98
HMGB1P1-201ENST00000522557 CDC14CA4D256 554 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 WASLO00401 505 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 TAS1R3Q7RTX0 852 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 GAS2L1Q99501 681 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P1-201ENST00000522557 ZBTB7BO15156 539 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 TLR1Q15399 786 aa8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 TIMMDC1Q9NPL8 285 aa8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 DYRK1BQ9Y463 629 aa8.93□□□□□ -0.98
HMGB1P1-201ENST00000522557 PSME1Q06323 249 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 RIPOR1Q6ZS17 1223 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 ARID3AQ99856 593 aa8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 MKRN1Q9UHC7 482 aaKnown RBP8.92□□□□□ -0.98
HMGB1P1-201ENST00000522557 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 SMTNP53814 917 aa8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 DBN1Q16643 649 aa8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 PPARGC1BQ86YN6 1023 aaKnown RBP8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 KIAA1024Q9UPX6 916 aa8.91□□□□□ -0.98
HMGB1P1-201ENST00000522557 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 CLDN10P78369 228 aa8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 KRT76Q01546 638 aa8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 GNASQ5JWF2 1037 aa8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 COL25A1Q9BXS0 654 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 PPP1R12CQ9BZL4 782 aa8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 MAFBQ9Y5Q3 323 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P1-201ENST00000522557 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P1-201ENST00000522557 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P1-201ENST00000522557 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
HMGB1P1-201ENST00000522557 A6NJY4 79 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 F11P03951 625 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 RNFT1Q5M7Z0 435 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 TRIM22Q8IYM9 498 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 ZNF837Q96EG3 531 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 GPAMQ9HCL2 828 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 ZNF358Q9NW07 568 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 SERPINA10Q9UK55 444 aa8.88□□□□□ -0.99
HMGB1P1-201ENST00000522557 MTFR1Q15390 333 aa8.87□□□□□ -0.99
HMGB1P1-201ENST00000522557 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
HMGB1P1-201ENST00000522557 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
HMGB1P1-201ENST00000522557 DNAAF2Q9NVR5 837 aaKnown RBP8.87□□□□□ -0.99
HMGB1P1-201ENST00000522557 GPR25O00155 361 aa8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 CDK2AP1O14519 115 aa8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 BACH1O14867 736 aa8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 PLA2G4AP47712 749 aa8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 ATP1A2P50993 1020 aa8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 GTPBP3Q969Y2 492 aaKnown RBP8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P1-201ENST00000522557 THBS1P07996 1170 aa8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 MSX1P28360 303 aa8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 TNS4Q8IZW8 715 aa8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
HMGB1P1-201ENST00000522557 A0A1B0GTH6 734 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 H7C1W4 665 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 DKK1O94907 266 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 RASA1P20936 1047 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 KANK4Q5T7N3 995 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 GMCL1Q96IK5 515 aa8.84□□□□□ -0.99
HMGB1P1-201ENST00000522557 SFI1A8K8P3 1242 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 EPHA4P54764 986 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 GAS6Q14393 721 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 TBCELQ5QJ74 424 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
HMGB1P1-201ENST00000522557 RUBCNLQ9H714 662 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 CABP1Q9NZU7 370 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
HMGB1P1-201ENST00000522557 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
HMGB1P1-201ENST00000522557 CFAP70Q5T0N1 1121 aa8.82□□□□□ -1
HMGB1P1-201ENST00000522557 CRTC2Q53ET0 693 aaPredicted RBP8.81□□□□□ -1
HMGB1P1-201ENST00000522557 CDCA8Q53HL2 280 aa8.81□□□□□ -1
HMGB1P1-201ENST00000522557 SIX5Q8N196 739 aa8.81□□□□□ -1
HMGB1P1-201ENST00000522557 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
HMGB1P1-201ENST00000522557 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms