RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 DDRGK1Q96HY6 314 aa32.5■■■□□ 2.79
COL13A1-214ENST00000522165 EIF4A1P60842 406 aaKnown RBP32.49■■■□□ 2.79
COL13A1-214ENST00000522165 FLIIQ13045 1269 aa32.49■■■□□ 2.79
COL13A1-214ENST00000522165 CCT4P50991 539 aaKnown RBP32.49■■■□□ 2.79
COL13A1-214ENST00000522165 NECTIN2Q92692 538 aa32.49■■■□□ 2.79
COL13A1-214ENST00000522165 F6X3S4 739 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 LNPKQ9C0E8 428 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 ATP10DQ9P241 1426 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 SEC24BO95487 1268 aa32.47■■■□□ 2.79
COL13A1-214ENST00000522165 NLRP2Q9NX02 1062 aa32.47■■■□□ 2.79
COL13A1-214ENST00000522165 HDGFL1Q5TGJ6 251 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 MEIS3Q99687 375 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 CPDO75976 1380 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 BTBD11A6QL63 1104 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 HOXB7P09629 217 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 ANKRD44Q8N8A2 993 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 SLAIN2Q9P270 581 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 ANKRD45Q5TZF3 282 aa32.45■■■□□ 2.79
COL13A1-214ENST00000522165 SLC4A10Q6U841 1118 aa32.45■■■□□ 2.79
COL13A1-214ENST00000522165 RPAP2Q8IXW5 612 aaPredicted RBP32.44■■■□□ 2.78
COL13A1-214ENST00000522165 FKBP5Q13451 457 aaPredicted RBP32.44■■■□□ 2.78
COL13A1-214ENST00000522165 RAPGEF4Q8WZA2 1011 aa32.44■■■□□ 2.78
COL13A1-214ENST00000522165 KCNQ3O43525 872 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 CHRNA2Q15822 529 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 ADAMTS7Q9UKP4 1686 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 CEP85Q6P2H3 762 aa32.42■■■□□ 2.78
COL13A1-214ENST00000522165 SOS2Q07890 1332 aaPredicted RBP32.41■■■□□ 2.78
COL13A1-214ENST00000522165 DCTPP1Q9H773 170 aa32.41■■■□□ 2.78
COL13A1-214ENST00000522165 CHMP4AQ9BY43 222 aa32.4■■■□□ 2.78
COL13A1-214ENST00000522165 CSB-PGBD3P0DP91 1061 aa32.39■■■□□ 2.78
COL13A1-214ENST00000522165 TATP17735 454 aaPredicted RBP32.39■■■□□ 2.78
COL13A1-214ENST00000522165 SIPA1L3O60292 1781 aaPredicted RBP32.38■■■□□ 2.77
COL13A1-214ENST00000522165 MEGF6O75095 1541 aa32.38■■■□□ 2.77
COL13A1-214ENST00000522165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.37■■■□□ 2.77
COL13A1-214ENST00000522165 PLEKHG2Q9H7P9 1386 aa32.37■■■□□ 2.77
COL13A1-214ENST00000522165 PXDNLA1KZ92 1463 aa32.37■■■□□ 2.77
COL13A1-214ENST00000522165 EIF2S2P20042 333 aaKnown RBP32.36■■■□□ 2.77
COL13A1-214ENST00000522165 N4BP2Q86UW6 1770 aaPredicted RBP32.36■■■□□ 2.77
COL13A1-214ENST00000522165 SPG7Q9UQ90 795 aa32.35■■■□□ 2.77
COL13A1-214ENST00000522165 PHAXQ9H814 394 aaKnown RBP32.34■■■□□ 2.77
COL13A1-214ENST00000522165 HEG1Q9ULI3 1381 aa32.33■■■□□ 2.77
COL13A1-214ENST00000522165 PHKG2P15735 406 aa32.31■■■□□ 2.76
COL13A1-214ENST00000522165 UPF2Q9HAU5 1272 aaKnown RBP32.31■■■□□ 2.76
COL13A1-214ENST00000522165 CHPF2Q9P2E5 772 aa32.31■■■□□ 2.76
COL13A1-214ENST00000522165 GNAI2P04899 355 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 BMP2KLQ5H9B9 411 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 SCN11AQ9UI33 1791 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 KDM6AO15550 1401 aaPredicted RBP32.3■■■□□ 2.76
COL13A1-214ENST00000522165 GNAI3P08754 354 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 GIGYF1O75420 1035 aaPredicted RBP32.29■■■□□ 2.76
COL13A1-214ENST00000522165 HMMRO75330 724 aa32.28■■■□□ 2.76
COL13A1-214ENST00000522165 IFNL2Q8IZJ0 200 aa32.28■■■□□ 2.76
COL13A1-214ENST00000522165 TBC1D32Q96NH3 1257 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 PRDM11Q9NQV5 511 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 PKD1L3Q7Z443 1732 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 SLC52A2Q9HAB3 445 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 DBF4Q9UBU7 674 aaPredicted RBP32.25■■■□□ 2.75
COL13A1-214ENST00000522165 NHSL1Q5SYE7 1610 aa32.23■■■□□ 2.75
COL13A1-214ENST00000522165 ABCA3Q99758 1704 aa32.23■■■□□ 2.75
COL13A1-214ENST00000522165 WDR17Q8IZU2 1322 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 CYP27B1O15528 508 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 USP44Q9H0E7 712 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 PLEKHM2Q8IWE5 1019 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 DAXXQ9UER7 740 aaPredicted RBP32.21■■■□□ 2.75
COL13A1-214ENST00000522165 ANXA1P04083 346 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 ZNF790Q6PG37 636 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 DCAF5Q96JK2 942 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 SRCIN1Q9C0H9 1055 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 MRC1P22897 1456 aa32.2■■■□□ 2.74
COL13A1-214ENST00000522165 PRAMEF22A3QJZ6 481 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 SLC4A3P48751 1232 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 NFATC2IPQ8NCF5 419 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 DNAAF4Q8WXU2 420 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 COL5A2P05997 1499 aaPredicted RBP32.19■■■□□ 2.74
COL13A1-214ENST00000522165 PI4KAP2A4QPH2 592 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 PI4KAP1Q8N8J0 262 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 ATP8B2P98198 1209 aa32.18■■■□□ 2.74
COL13A1-214ENST00000522165 HSP90AB1P08238 724 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 MFAP1P55081 439 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 LRRFIP2Q9Y608 721 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 ADCY9O60503 1353 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 SLC39A6Q13433 755 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 BEND3Q5T5X7 828 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 C16orf71Q8IYS4 520 aaPredicted RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 UBTFL1P0CB47 393 aaPredicted RBP32.16■■■□□ 2.74
COL13A1-214ENST00000522165 PROSER3Q2NL68 480 aa32.15■■■□□ 2.74
COL13A1-214ENST00000522165 TOM1L2Q6ZVM7 507 aa32.15■■■□□ 2.74
COL13A1-214ENST00000522165 PARP4Q9UKK3 1724 aaKnown RBP32.15■■■□□ 2.74
COL13A1-214ENST00000522165 SMARCA5O60264 1052 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-214ENST00000522165 APBB1O00213 710 aa32.14■■■□□ 2.74
COL13A1-214ENST00000522165 C22orf23Q9BZE7 217 aa32.14■■■□□ 2.74
COL13A1-214ENST00000522165 PNMA6EA0A0J9YXQ4 647 aa32.13■■■□□ 2.73
COL13A1-214ENST00000522165 HYPKQ9NX55 129 aa32.13■■■□□ 2.73
COL13A1-214ENST00000522165 GSPT1P15170 499 aaKnown RBP32.12■■■□□ 2.73
COL13A1-214ENST00000522165 OTUD7AQ8TE49 926 aaPredicted RBP32.12■■■□□ 2.73
COL13A1-214ENST00000522165 TTC22Q5TAA0 569 aa32.11■■■□□ 2.73
COL13A1-214ENST00000522165 DDX21Q9NR30 783 aaKnown RBP eCLIP32.11■■■□□ 2.73
COL13A1-214ENST00000522165 C5P01031 1676 aa32.1■■■□□ 2.73
COL13A1-214ENST00000522165 CARD10Q9BWT7 1032 aa32.1■■■□□ 2.73
COL13A1-214ENST00000522165 KSR2Q6VAB6 950 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms