RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 DDRGK1Q96HY6 314 aa32.5■■■□□ 2.79
COL13A1-214ENST00000522165 EIF4A1P60842 406 aaKnown RBP32.49■■■□□ 2.79
COL13A1-214ENST00000522165 FLIIQ13045 1269 aa32.49■■■□□ 2.79
COL13A1-214ENST00000522165 CCT4P50991 539 aaKnown RBP32.49■■■□□ 2.79
COL13A1-214ENST00000522165 NECTIN2Q92692 538 aa32.49■■■□□ 2.79
COL13A1-214ENST00000522165 F6X3S4 739 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 LNPKQ9C0E8 428 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 ATP10DQ9P241 1426 aa32.48■■■□□ 2.79
COL13A1-214ENST00000522165 SEC24BO95487 1268 aa32.47■■■□□ 2.79
COL13A1-214ENST00000522165 NLRP2Q9NX02 1062 aa32.47■■■□□ 2.79
COL13A1-214ENST00000522165 HDGFL1Q5TGJ6 251 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 MEIS3Q99687 375 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 CPDO75976 1380 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 BTBD11A6QL63 1104 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 HOXB7P09629 217 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 ANKRD44Q8N8A2 993 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 SLAIN2Q9P270 581 aa32.46■■■□□ 2.79
COL13A1-214ENST00000522165 ANKRD45Q5TZF3 282 aa32.45■■■□□ 2.79
COL13A1-214ENST00000522165 SLC4A10Q6U841 1118 aa32.45■■■□□ 2.79
COL13A1-214ENST00000522165 RPAP2Q8IXW5 612 aaPredicted RBP32.44■■■□□ 2.78
COL13A1-214ENST00000522165 FKBP5Q13451 457 aaPredicted RBP32.44■■■□□ 2.78
COL13A1-214ENST00000522165 RAPGEF4Q8WZA2 1011 aa32.44■■■□□ 2.78
COL13A1-214ENST00000522165 KCNQ3O43525 872 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 CHRNA2Q15822 529 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 ADAMTS7Q9UKP4 1686 aa32.43■■■□□ 2.78
COL13A1-214ENST00000522165 CEP85Q6P2H3 762 aa32.42■■■□□ 2.78
COL13A1-214ENST00000522165 SOS2Q07890 1332 aaPredicted RBP32.41■■■□□ 2.78
COL13A1-214ENST00000522165 DCTPP1Q9H773 170 aa32.41■■■□□ 2.78
COL13A1-214ENST00000522165 CHMP4AQ9BY43 222 aa32.4■■■□□ 2.78
COL13A1-214ENST00000522165 CSB-PGBD3P0DP91 1061 aa32.39■■■□□ 2.78
COL13A1-214ENST00000522165 TATP17735 454 aaPredicted RBP32.39■■■□□ 2.78
COL13A1-214ENST00000522165 SIPA1L3O60292 1781 aaPredicted RBP32.38■■■□□ 2.77
COL13A1-214ENST00000522165 MEGF6O75095 1541 aa32.38■■■□□ 2.77
COL13A1-214ENST00000522165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.37■■■□□ 2.77
COL13A1-214ENST00000522165 PLEKHG2Q9H7P9 1386 aa32.37■■■□□ 2.77
COL13A1-214ENST00000522165 PXDNLA1KZ92 1463 aa32.37■■■□□ 2.77
COL13A1-214ENST00000522165 EIF2S2P20042 333 aaKnown RBP32.36■■■□□ 2.77
COL13A1-214ENST00000522165 N4BP2Q86UW6 1770 aaPredicted RBP32.36■■■□□ 2.77
COL13A1-214ENST00000522165 SPG7Q9UQ90 795 aa32.35■■■□□ 2.77
COL13A1-214ENST00000522165 PHAXQ9H814 394 aaKnown RBP32.34■■■□□ 2.77
COL13A1-214ENST00000522165 HEG1Q9ULI3 1381 aa32.33■■■□□ 2.77
COL13A1-214ENST00000522165 PHKG2P15735 406 aa32.31■■■□□ 2.76
COL13A1-214ENST00000522165 UPF2Q9HAU5 1272 aaKnown RBP32.31■■■□□ 2.76
COL13A1-214ENST00000522165 CHPF2Q9P2E5 772 aa32.31■■■□□ 2.76
COL13A1-214ENST00000522165 GNAI2P04899 355 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 BMP2KLQ5H9B9 411 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 SCN11AQ9UI33 1791 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 KDM6AO15550 1401 aaPredicted RBP32.3■■■□□ 2.76
COL13A1-214ENST00000522165 GNAI3P08754 354 aa32.3■■■□□ 2.76
COL13A1-214ENST00000522165 GIGYF1O75420 1035 aaPredicted RBP32.29■■■□□ 2.76
COL13A1-214ENST00000522165 HMMRO75330 724 aa32.28■■■□□ 2.76
COL13A1-214ENST00000522165 IFNL2Q8IZJ0 200 aa32.28■■■□□ 2.76
COL13A1-214ENST00000522165 TBC1D32Q96NH3 1257 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 PRDM11Q9NQV5 511 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 PKD1L3Q7Z443 1732 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 SLC52A2Q9HAB3 445 aa32.27■■■□□ 2.76
COL13A1-214ENST00000522165 DBF4Q9UBU7 674 aaPredicted RBP32.25■■■□□ 2.75
COL13A1-214ENST00000522165 NHSL1Q5SYE7 1610 aa32.23■■■□□ 2.75
COL13A1-214ENST00000522165 ABCA3Q99758 1704 aa32.23■■■□□ 2.75
COL13A1-214ENST00000522165 WDR17Q8IZU2 1322 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 CYP27B1O15528 508 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 USP44Q9H0E7 712 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 PLEKHM2Q8IWE5 1019 aa32.22■■■□□ 2.75
COL13A1-214ENST00000522165 DAXXQ9UER7 740 aaPredicted RBP32.21■■■□□ 2.75
COL13A1-214ENST00000522165 ANXA1P04083 346 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 ZNF790Q6PG37 636 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 DCAF5Q96JK2 942 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 SRCIN1Q9C0H9 1055 aa32.2■■■□□ 2.75
COL13A1-214ENST00000522165 MRC1P22897 1456 aa32.2■■■□□ 2.74
COL13A1-214ENST00000522165 PRAMEF22A3QJZ6 481 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 SLC4A3P48751 1232 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 NFATC2IPQ8NCF5 419 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 DNAAF4Q8WXU2 420 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 COL5A2P05997 1499 aaPredicted RBP32.19■■■□□ 2.74
COL13A1-214ENST00000522165 PI4KAP2A4QPH2 592 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 PI4KAP1Q8N8J0 262 aa32.19■■■□□ 2.74
COL13A1-214ENST00000522165 ATP8B2P98198 1209 aa32.18■■■□□ 2.74
COL13A1-214ENST00000522165 HSP90AB1P08238 724 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 MFAP1P55081 439 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 LRRFIP2Q9Y608 721 aaKnown RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 ADCY9O60503 1353 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 SLC39A6Q13433 755 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 BEND3Q5T5X7 828 aa32.17■■■□□ 2.74
COL13A1-214ENST00000522165 C16orf71Q8IYS4 520 aaPredicted RBP32.17■■■□□ 2.74
COL13A1-214ENST00000522165 UBTFL1P0CB47 393 aaPredicted RBP32.16■■■□□ 2.74
COL13A1-214ENST00000522165 PROSER3Q2NL68 480 aa32.15■■■□□ 2.74
COL13A1-214ENST00000522165 TOM1L2Q6ZVM7 507 aa32.15■■■□□ 2.74
COL13A1-214ENST00000522165 PARP4Q9UKK3 1724 aaKnown RBP32.15■■■□□ 2.74
COL13A1-214ENST00000522165 SMARCA5O60264 1052 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-214ENST00000522165 APBB1O00213 710 aa32.14■■■□□ 2.74
COL13A1-214ENST00000522165 C22orf23Q9BZE7 217 aa32.14■■■□□ 2.74
COL13A1-214ENST00000522165 PNMA6EA0A0J9YXQ4 647 aa32.13■■■□□ 2.73
COL13A1-214ENST00000522165 HYPKQ9NX55 129 aa32.13■■■□□ 2.73
COL13A1-214ENST00000522165 GSPT1P15170 499 aaKnown RBP32.12■■■□□ 2.73
COL13A1-214ENST00000522165 OTUD7AQ8TE49 926 aaPredicted RBP32.12■■■□□ 2.73
COL13A1-214ENST00000522165 TTC22Q5TAA0 569 aa32.11■■■□□ 2.73
COL13A1-214ENST00000522165 DDX21Q9NR30 783 aaKnown RBP eCLIP32.11■■■□□ 2.73
COL13A1-214ENST00000522165 C5P01031 1676 aa32.1■■■□□ 2.73
COL13A1-214ENST00000522165 CARD10Q9BWT7 1032 aa32.1■■■□□ 2.73
COL13A1-214ENST00000522165 KSR2Q6VAB6 950 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms