RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 JRKLQ9Y4A0 524 aa14.39□□□□□ -0.11
SPIDR-217ENST00000522117 NUP155O75694 1391 aa14.39□□□□□ -0.11
SPIDR-217ENST00000522117 LRMPQ12912 555 aa14.39□□□□□ -0.11
SPIDR-217ENST00000522117 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
SPIDR-217ENST00000522117 GDPD2Q9HCC8 539 aa14.39□□□□□ -0.11
SPIDR-217ENST00000522117 IFT57Q9NWB7 429 aa14.38□□□□□ -0.11
SPIDR-217ENST00000522117 IQGAP3Q86VI3 1631 aa14.38□□□□□ -0.11
SPIDR-217ENST00000522117 ST18O60284 1047 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 H2AFXP16104 143 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-217ENST00000522117 ANKRD45Q5TZF3 282 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 DRC1Q96MC2 740 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 ABCC1P33527 1531 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 MX1P20591 662 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 SRLQ86TD4 932 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 ERO1AQ96HE7 468 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
SPIDR-217ENST00000522117 NBPF20Q3BBV1 942 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 RGL3Q3MIN7 710 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 LRRFIP2Q9Y608 721 aaKnown RBP14.36□□□□□ -0.11
SPIDR-217ENST00000522117 ATP10AO60312 1499 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 ST5P78524 1137 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 SMARCE1Q969G3 411 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-217ENST00000522117 REREQ9P2R6 1566 aa14.36□□□□□ -0.11
SPIDR-217ENST00000522117 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
SPIDR-217ENST00000522117 ZSCAN26Q16670 478 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 DONSONQ9NYP3 566 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
SPIDR-217ENST00000522117 ATP2B1P20020 1258 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 SART3Q15020 963 aaKnown RBP14.35□□□□□ -0.11
SPIDR-217ENST00000522117 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 PACS2Q86VP3 889 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 TCP11L2Q8N4U5 519 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 RRP15Q9Y3B9 282 aaKnown RBP14.35□□□□□ -0.11
SPIDR-217ENST00000522117 A2MP01023 1474 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
SPIDR-217ENST00000522117 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
SPIDR-217ENST00000522117 A0A1B0GUL7 405 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 SATB1Q01826 763 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 TPD52L1Q16890 204 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-217ENST00000522117 RUNDC1Q96C34 613 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 ABCA9Q8IUA7 1624 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 FANCAO15360 1455 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
SPIDR-217ENST00000522117 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPIDR-217ENST00000522117 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.11
SPIDR-217ENST00000522117 MYOM1P52179 1685 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 FOXD4L6Q3SYB3 417 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-217ENST00000522117 FOXD4L3Q6VB84 417 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-217ENST00000522117 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 POLR3GO15318 223 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-217ENST00000522117 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 CEP120Q8N960 986 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
SPIDR-217ENST00000522117 CLCN6P51797 869 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 GSCP56915 257 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-217ENST00000522117 SSH1Q8WYL5 1049 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 TMX3Q96JJ7 454 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 CXorf56Q9H5V9 222 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-217ENST00000522117 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 TTC31Q49AM3 519 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-217ENST00000522117 CFAP65Q6ZU64 1925 aaKnown RBP14.32□□□□□ -0.12
SPIDR-217ENST00000522117 GOLGA6L1Q8N7Z2 621 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 FBXO18Q8NFZ0 1043 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
SPIDR-217ENST00000522117 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
SPIDR-217ENST00000522117 MAFGO15525 162 aa14.31□□□□□ -0.12
SPIDR-217ENST00000522117 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
SPIDR-217ENST00000522117 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
SPIDR-217ENST00000522117 ZRANB2O95218 330 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPIDR-217ENST00000522117 TPM4P67936 248 aa14.31□□□□□ -0.12
SPIDR-217ENST00000522117 CUL4AQ13619 759 aa14.31□□□□□ -0.12
SPIDR-217ENST00000522117 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
SPIDR-217ENST00000522117 SLU7O95391 586 aaKnown RBP14.3□□□□□ -0.12
SPIDR-217ENST00000522117 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-217ENST00000522117 DNAJC21Q5F1R6 531 aaKnown RBP14.3□□□□□ -0.12
SPIDR-217ENST00000522117 NYAP1Q6ZVC0 841 aa14.3□□□□□ -0.12
SPIDR-217ENST00000522117 NOS1P29475 1434 aa14.3□□□□□ -0.12
SPIDR-217ENST00000522117 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
SPIDR-217ENST00000522117 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
SPIDR-217ENST00000522117 STK26Q9P289 416 aa14.3□□□□□ -0.12
SPIDR-217ENST00000522117 GOLGA5Q8TBA6 731 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
SPIDR-217ENST00000522117 USP27XA6NNY8 438 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 NPHP1O15259 732 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms