RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 GOLGB1Q14789 3259 aaKnown RBP28.52■■■□□ 2.16
PABPC1-218ENST00000521865 HSP90AB1P08238 724 aaKnown RBP28.52■■■□□ 2.16
PABPC1-218ENST00000521865 KNSTRNQ9Y448 316 aa28.51■■■□□ 2.15
PABPC1-218ENST00000521865 PLEKHG2Q9H7P9 1386 aa28.5■■■□□ 2.15
PABPC1-218ENST00000521865 ZNF530Q6P9A1 599 aaPredicted RBP28.5■■■□□ 2.15
PABPC1-218ENST00000521865 DCAF5Q96JK2 942 aa28.5■■■□□ 2.15
PABPC1-218ENST00000521865 RBM42Q9BTD8 480 aaKnown RBP28.5■■■□□ 2.15
PABPC1-218ENST00000521865 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
PABPC1-218ENST00000521865 C1QTNF8P60827 252 aa28.48■■■□□ 2.15
PABPC1-218ENST00000521865 AMOTQ4VCS5 1084 aa28.48■■■□□ 2.15
PABPC1-218ENST00000521865 GIGYF1O75420 1035 aaPredicted RBP28.47■■■□□ 2.15
PABPC1-218ENST00000521865 CABP4P57796 275 aa28.46■■■□□ 2.15
PABPC1-218ENST00000521865 C1orf141Q5JVX7 400 aa28.46■■■□□ 2.15
PABPC1-218ENST00000521865 SENP3-EIF4A1A0A087X0R7 540 aa28.45■■■□□ 2.14
PABPC1-218ENST00000521865 AEBP1Q8IUX7 1158 aa28.45■■■□□ 2.14
PABPC1-218ENST00000521865 WWC3Q9ULE0 1092 aa28.45■■■□□ 2.14
PABPC1-218ENST00000521865 RTCBQ9Y3I0 505 aaKnown RBP28.44■■■□□ 2.14
PABPC1-218ENST00000521865 UBR3Q6ZT12 1888 aa28.43■■■□□ 2.14
PABPC1-218ENST00000521865 MTHFSP49914 203 aa28.43■■■□□ 2.14
PABPC1-218ENST00000521865 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
PABPC1-218ENST00000521865 TRAPPC3LQ5T215 181 aa28.42■■■□□ 2.14
PABPC1-218ENST00000521865 KDRP35968 1356 aa28.41■■■□□ 2.14
PABPC1-218ENST00000521865 MMP10P09238 476 aa28.4■■■□□ 2.14
PABPC1-218ENST00000521865 SLC4A9Q96Q91 983 aa28.4■■■□□ 2.14
PABPC1-218ENST00000521865 KDM6AO15550 1401 aaPredicted RBP28.39■■■□□ 2.14
PABPC1-218ENST00000521865 PTCD1O75127 700 aaKnown RBP28.37■■■□□ 2.13
PABPC1-218ENST00000521865 IL13P35225 146 aa28.36■■■□□ 2.13
PABPC1-218ENST00000521865 RC3H1Q5TC82 1133 aaKnown RBP28.36■■■□□ 2.13
PABPC1-218ENST00000521865 RFC4P35249 363 aa28.35■■■□□ 2.13
PABPC1-218ENST00000521865 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
PABPC1-218ENST00000521865 NFATC2IPQ8NCF5 419 aa28.35■■■□□ 2.13
PABPC1-218ENST00000521865 ARHGEF1Q92888 912 aaKnown RBP28.35■■■□□ 2.13
PABPC1-218ENST00000521865 ADRA2BP18089 450 aa28.34■■■□□ 2.13
PABPC1-218ENST00000521865 AMER1Q5JTC6 1135 aaPredicted RBP28.34■■■□□ 2.13
PABPC1-218ENST00000521865 KIF7Q2M1P5 1343 aa28.34■■■□□ 2.13
PABPC1-218ENST00000521865 CNTNAP4Q9C0A0 1308 aa28.34■■■□□ 2.13
PABPC1-218ENST00000521865 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
PABPC1-218ENST00000521865 RPS6KA4O75676 772 aa28.33■■■□□ 2.13
PABPC1-218ENST00000521865 GPBP1L1Q9HC44 474 aaPredicted RBP28.3■■■□□ 2.12
PABPC1-218ENST00000521865 AKAP4Q5JQC9 854 aa28.29■■■□□ 2.12
PABPC1-218ENST00000521865 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
PABPC1-218ENST00000521865 HMOX1P09601 288 aa28.28■■■□□ 2.12
PABPC1-218ENST00000521865 GYS1P13807 737 aa28.28■■■□□ 2.12
PABPC1-218ENST00000521865 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
PABPC1-218ENST00000521865 CRKLP46109 303 aaKnown RBP28.27■■■□□ 2.12
PABPC1-218ENST00000521865 CC2D1BQ5T0F9 858 aaKnown RBP28.27■■■□□ 2.12
PABPC1-218ENST00000521865 CCDC87Q9NVE4 849 aa28.27■■■□□ 2.12
PABPC1-218ENST00000521865 TGFB2P61812 414 aa28.26■■■□□ 2.11
PABPC1-218ENST00000521865 CICQ96RK0 1608 aaPredicted RBP28.25■■■□□ 2.11
PABPC1-218ENST00000521865 ZNF831Q5JPB2 1677 aa28.25■■■□□ 2.11
PABPC1-218ENST00000521865 A0A0G2JLW4 131 aa28.24■■■□□ 2.11
PABPC1-218ENST00000521865 CNGB1Q14028 1251 aaPredicted RBP28.24■■■□□ 2.11
PABPC1-218ENST00000521865 BCS1LQ9Y276 419 aa28.24■■■□□ 2.11
PABPC1-218ENST00000521865 PXDNLA1KZ92 1463 aa28.23■■■□□ 2.11
PABPC1-218ENST00000521865 SLC52A2Q9HAB3 445 aa28.23■■■□□ 2.11
PABPC1-218ENST00000521865 DIAPH1O60610 1272 aaKnown RBP28.22■■■□□ 2.11
PABPC1-218ENST00000521865 LGR6Q9HBX8 967 aa28.22■■■□□ 2.11
PABPC1-218ENST00000521865 ADCY9O60503 1353 aa28.22■■■□□ 2.11
PABPC1-218ENST00000521865 COL5A3P25940 1745 aaPredicted RBP28.21■■■□□ 2.11
PABPC1-218ENST00000521865 C10orf71Q711Q0 1435 aa28.21■■■□□ 2.11
PABPC1-218ENST00000521865 SRP68Q9UHB9 627 aaKnown RBP28.21■■■□□ 2.11
PABPC1-218ENST00000521865 PER1O15534 1290 aaPredicted RBP28.19■■■□□ 2.1
PABPC1-218ENST00000521865 RNMTO43148 476 aaKnown RBP28.19■■■□□ 2.1
PABPC1-218ENST00000521865 DPEP1P16444 411 aa28.19■■■□□ 2.1
PABPC1-218ENST00000521865 DNAJC10Q8IXB1 793 aa28.18■■■□□ 2.1
PABPC1-218ENST00000521865 USP42Q9H9J4 1324 aaKnown RBP28.18■■■□□ 2.1
PABPC1-218ENST00000521865 FCHSD2O94868 740 aa28.17■■■□□ 2.1
PABPC1-218ENST00000521865 SLC39A6Q13433 755 aa28.17■■■□□ 2.1
PABPC1-218ENST00000521865 MTHFSDQ2M296 383 aaKnown RBP28.17■■■□□ 2.1
PABPC1-218ENST00000521865 FKBP8Q14318 412 aa28.16■■■□□ 2.1
PABPC1-218ENST00000521865 INTS5Q6P9B9 1019 aaKnown RBP28.16■■■□□ 2.1
PABPC1-218ENST00000521865 C4AP0C0L4 1744 aa28.15■■■□□ 2.1
PABPC1-218ENST00000521865 ZPR1O75312 459 aa28.15■■■□□ 2.1
PABPC1-218ENST00000521865 ARHGAP27Q6ZUM4 889 aa28.15■■■□□ 2.1
PABPC1-218ENST00000521865 U2SURPO15042 1029 aaKnown RBP28.14■■■□□ 2.1
PABPC1-218ENST00000521865 MYH14Q7Z406 1995 aaKnown RBP28.12■■■□□ 2.09
PABPC1-218ENST00000521865 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
PABPC1-218ENST00000521865 DDR1Q08345 913 aa28.11■■■□□ 2.09
PABPC1-218ENST00000521865 USPL1Q5W0Q7 1092 aa28.11■■■□□ 2.09
PABPC1-218ENST00000521865 TJP1Q07157 1748 aa28.11■■■□□ 2.09
PABPC1-218ENST00000521865 N4BP2Q86UW6 1770 aaPredicted RBP28.1■■■□□ 2.09
PABPC1-218ENST00000521865 CYP19A1P11511 503 aaPredicted RBP28.1■■■□□ 2.09
PABPC1-218ENST00000521865 PIM2Q9P1W9 311 aa28.1■■■□□ 2.09
PABPC1-218ENST00000521865 KIF13BQ9NQT8 1826 aa28.1■■■□□ 2.09
PABPC1-218ENST00000521865 MRC1P22897 1456 aa28.09■■■□□ 2.09
PABPC1-218ENST00000521865 SOS1Q07889 1333 aaPredicted RBP28.09■■■□□ 2.09
PABPC1-218ENST00000521865 TTC5Q8N0Z6 440 aa28.08■■■□□ 2.09
PABPC1-218ENST00000521865 KIAA1551Q9HCM1 1747 aa28.07■■■□□ 2.08
PABPC1-218ENST00000521865 KCNA3P22001 575 aa28.07■■■□□ 2.08
PABPC1-218ENST00000521865 ZBTB1Q9Y2K1 713 aa28.07■■■□□ 2.08
PABPC1-218ENST00000521865 POLRMTO00411 1230 aaKnown RBP28.06■■■□□ 2.08
PABPC1-218ENST00000521865 DALRD3Q5D0E6 543 aaKnown RBP28.06■■■□□ 2.08
PABPC1-218ENST00000521865 TM4SF1P30408 202 aa28.05■■■□□ 2.08
PABPC1-218ENST00000521865 TEFQ10587 303 aa28.05■■■□□ 2.08
PABPC1-218ENST00000521865 VSIG10Q8N0Z9 540 aa28.05■■■□□ 2.08
PABPC1-218ENST00000521865 NPC1L1Q9UHC9 1359 aa28.05■■■□□ 2.08
PABPC1-218ENST00000521865 COL15A1P39059 1388 aa28.04■■■□□ 2.08
PABPC1-218ENST00000521865 CHRNA5P30532 468 aa28.04■■■□□ 2.08
PABPC1-218ENST00000521865 GAS2L2Q8NHY3 880 aa28.04■■■□□ 2.08
PABPC1-218ENST00000521865 NARFQ9UHQ1 456 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms