RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
SKP1-208ENST00000521216 ARXQ96QS3 562 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 BACH1O14867 736 aa9.66□□□□□ -0.86
SKP1-208ENST00000521216 IL2RAP01589 272 aa9.66□□□□□ -0.86
SKP1-208ENST00000521216 Q6ZNB5 142 aa9.66□□□□□ -0.86
SKP1-208ENST00000521216 INSM2Q96T92 566 aaPredicted RBP9.66□□□□□ -0.86
SKP1-208ENST00000521216 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
SKP1-208ENST00000521216 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
SKP1-208ENST00000521216 DKK1O94907 266 aa9.65□□□□□ -0.86
SKP1-208ENST00000521216 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
SKP1-208ENST00000521216 CLN3Q13286 438 aa9.65□□□□□ -0.86
SKP1-208ENST00000521216 TSEN2Q8NCE0 465 aaKnown RBP9.65□□□□□ -0.86
SKP1-208ENST00000521216 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
SKP1-208ENST00000521216 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
SKP1-208ENST00000521216 SPINT1O43278 529 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 TLR1Q15399 786 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 SLC27A3Q5K4L6 730 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 TRIM46Q7Z4K8 759 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 CRIPAKQ8N1N5 446 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 DACH1Q9UI36 760 aa9.63□□□□□ -0.87
SKP1-208ENST00000521216 CENPCQ03188 943 aa9.62□□□□□ -0.87
SKP1-208ENST00000521216 ZFP42Q96MM3 310 aa9.62□□□□□ -0.87
SKP1-208ENST00000521216 WASLO00401 505 aaPredicted RBP9.61□□□□□ -0.87
SKP1-208ENST00000521216 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
SKP1-208ENST00000521216 SMTNP53814 917 aa9.61□□□□□ -0.87
SKP1-208ENST00000521216 PDE4CQ08493 712 aa9.61□□□□□ -0.87
SKP1-208ENST00000521216 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
SKP1-208ENST00000521216 A6NJY4 79 aa9.6□□□□□ -0.87
SKP1-208ENST00000521216 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
SKP1-208ENST00000521216 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
SKP1-208ENST00000521216 USTQ9Y2C2 406 aa9.6□□□□□ -0.87
SKP1-208ENST00000521216 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 FIGNL2A6NMB9 653 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 M0R2N6 131 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 PRMT3O60678 531 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
SKP1-208ENST00000521216 PRIMPOLQ96LW4 560 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
SKP1-208ENST00000521216 ZSCAN10Q96SZ4 725 aaPredicted RBP9.59□□□□□ -0.87
SKP1-208ENST00000521216 TTLL8A6PVC2 850 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 SWI5Q1ZZU3 235 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 PRICKLE2Q7Z3G6 844 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
SKP1-208ENST00000521216 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
SKP1-208ENST00000521216 RNF144AP50876 292 aaPredicted RBP9.57□□□□□ -0.88
SKP1-208ENST00000521216 SCG3Q8WXD2 468 aaKnown RBP9.57□□□□□ -0.88
SKP1-208ENST00000521216 TSPAN10Q9H1Z9 355 aaPredicted RBP9.57□□□□□ -0.88
SKP1-208ENST00000521216 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
SKP1-208ENST00000521216 SLC9A9Q8IVB4 645 aa9.56□□□□□ -0.88
SKP1-208ENST00000521216 FHDC1Q9C0D6 1143 aaPredicted RBP9.56□□□□□ -0.88
SKP1-208ENST00000521216 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
SKP1-208ENST00000521216 GPC1P35052 558 aa9.55□□□□□ -0.88
SKP1-208ENST00000521216 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
SKP1-208ENST00000521216 GRIP2Q9C0E4 1043 aa9.55□□□□□ -0.88
SKP1-208ENST00000521216 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
SKP1-208ENST00000521216 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
SKP1-208ENST00000521216 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
SKP1-208ENST00000521216 MAN1A2O60476 641 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 PHKA2P46019 1235 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 EPHA4P54764 986 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 POU4F2Q12837 409 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 MTFR1Q15390 333 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 LYSMD3Q7Z3D4 306 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 RNF217Q8TC41 542 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
SKP1-208ENST00000521216 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
SKP1-208ENST00000521216 SOBPA7XYQ1 873 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 RHOQP17081 205 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
SKP1-208ENST00000521216 NBPF15Q8N660 670 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 SENP2Q9HC62 589 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 GMPR2Q9P2T1 348 aaKnown RBP9.53□□□□□ -0.88
SKP1-208ENST00000521216 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
SKP1-208ENST00000521216 FOXK2Q01167 660 aa9.52□□□□□ -0.89
SKP1-208ENST00000521216 NIFKQ9BYG3 293 aaKnown RBP9.52□□□□□ -0.89
SKP1-208ENST00000521216 ZNF232Q9UNY5 417 aa9.52□□□□□ -0.89
SKP1-208ENST00000521216 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
SKP1-208ENST00000521216 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
SKP1-208ENST00000521216 WEE1P30291 646 aa9.51□□□□□ -0.89
SKP1-208ENST00000521216 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
SKP1-208ENST00000521216 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
SKP1-208ENST00000521216 TRAIPQ9BWF2 469 aa9.51□□□□□ -0.89
SKP1-208ENST00000521216 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
SKP1-208ENST00000521216 LCE2BO14633 110 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 C21orf2O43822 256 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 IGFBP4P22692 258 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 PLA2G4AP47712 749 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 OCLNQ16625 522 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 TAS1R3Q7RTX0 852 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
SKP1-208ENST00000521216 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms