RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 HOXB7P09629 217 aa20.55■□□□□ 0.88
SNHG6-201ENST00000520348 TEFQ10587 303 aa20.55■□□□□ 0.88
SNHG6-201ENST00000520348 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
SNHG6-201ENST00000520348 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
SNHG6-201ENST00000520348 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
SNHG6-201ENST00000520348 RGS12O14924 1447 aa20.54■□□□□ 0.88
SNHG6-201ENST00000520348 ELL2O00472 640 aaPredicted RBP20.54■□□□□ 0.88
SNHG6-201ENST00000520348 EVA1CP58658 441 aa20.54■□□□□ 0.88
SNHG6-201ENST00000520348 NKX1-1Q15270 411 aaPredicted RBP20.54■□□□□ 0.88
SNHG6-201ENST00000520348 STRN4Q9NRL3 753 aa20.54■□□□□ 0.88
SNHG6-201ENST00000520348 EIF4A1P60842 406 aaKnown RBP20.53■□□□□ 0.88
SNHG6-201ENST00000520348 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
SNHG6-201ENST00000520348 ABCC4O15439 1325 aa20.53■□□□□ 0.88
SNHG6-201ENST00000520348 ZCRB1Q8TBF4 217 aaKnown RBP20.52■□□□□ 0.88
SNHG6-201ENST00000520348 COG6Q9Y2V7 657 aa20.52■□□□□ 0.88
SNHG6-201ENST00000520348 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
SNHG6-201ENST00000520348 CACNA1FO60840 1977 aa20.52■□□□□ 0.87
SNHG6-201ENST00000520348 GLI3P10071 1580 aa20.51■□□□□ 0.87
SNHG6-201ENST00000520348 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
SNHG6-201ENST00000520348 LRP6O75581 1613 aa20.51■□□□□ 0.87
SNHG6-201ENST00000520348 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
SNHG6-201ENST00000520348 PTPRCP08575 1304 aa20.5■□□□□ 0.87
SNHG6-201ENST00000520348 KDM2BQ8NHM5 1336 aa20.5■□□□□ 0.87
SNHG6-201ENST00000520348 FTSJ3Q8IY81 847 aaKnown RBP20.49■□□□□ 0.87
SNHG6-201ENST00000520348 API5Q9BZZ5 524 aaKnown RBP20.49■□□□□ 0.87
SNHG6-201ENST00000520348 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
SNHG6-201ENST00000520348 SPATA31A6Q5VVP1 1343 aa20.49■□□□□ 0.87
SNHG6-201ENST00000520348 CLUAP1Q96AJ1 413 aa20.48■□□□□ 0.87
SNHG6-201ENST00000520348 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
SNHG6-201ENST00000520348 N4BP2Q86UW6 1770 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-201ENST00000520348 TNS2Q63HR2 1409 aa20.47■□□□□ 0.87
SNHG6-201ENST00000520348 PELP1Q8IZL8 1130 aaKnown RBP20.47■□□□□ 0.87
SNHG6-201ENST00000520348 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
SNHG6-201ENST00000520348 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
SNHG6-201ENST00000520348 THRAP3Q9Y2W1 955 aaKnown RBP20.47■□□□□ 0.87
SNHG6-201ENST00000520348 UBR2Q8IWV8 1755 aa20.46■□□□□ 0.87
SNHG6-201ENST00000520348 KCNQ3O43525 872 aa20.46■□□□□ 0.87
SNHG6-201ENST00000520348 CCDC30Q5VVM6 783 aa20.46■□□□□ 0.87
SNHG6-201ENST00000520348 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
SNHG6-201ENST00000520348 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
SNHG6-201ENST00000520348 ADAMTS2O95450 1211 aa20.45■□□□□ 0.86
SNHG6-201ENST00000520348 TMEM57Q8N5G2 664 aa20.45■□□□□ 0.86
SNHG6-201ENST00000520348 CDCA7Q9BWT1 371 aaPredicted RBP20.45■□□□□ 0.86
SNHG6-201ENST00000520348 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
SNHG6-201ENST00000520348 SPATA31A5Q5VU36 1347 aa20.44■□□□□ 0.86
SNHG6-201ENST00000520348 SPATA31A7Q8IWB4 1347 aa20.44■□□□□ 0.86
SNHG6-201ENST00000520348 C5P01031 1676 aa20.43■□□□□ 0.86
SNHG6-201ENST00000520348 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
SNHG6-201ENST00000520348 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
SNHG6-201ENST00000520348 GIGYF1O75420 1035 aaPredicted RBP20.42■□□□□ 0.86
SNHG6-201ENST00000520348 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
SNHG6-201ENST00000520348 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
SNHG6-201ENST00000520348 BCL9LQ86UU0 1499 aa20.42■□□□□ 0.86
SNHG6-201ENST00000520348 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
SNHG6-201ENST00000520348 HDGFL1Q5TGJ6 251 aa20.41■□□□□ 0.86
SNHG6-201ENST00000520348 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
SNHG6-201ENST00000520348 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
SNHG6-201ENST00000520348 CENPQQ7L2Z9 268 aaPredicted RBP20.41■□□□□ 0.86
SNHG6-201ENST00000520348 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
SNHG6-201ENST00000520348 NUTM2BA6NNL0 878 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-201ENST00000520348 NUTM2EB1AL46 878 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-201ENST00000520348 KCPQ6ZWJ8 1503 aa20.4■□□□□ 0.86
SNHG6-201ENST00000520348 NUTM2AQ8IVF1 878 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-201ENST00000520348 ITPRIPQ8IWB1 547 aa20.4■□□□□ 0.86
SNHG6-201ENST00000520348 FNBP4Q8N3X1 1017 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-201ENST00000520348 ZBTB40Q9NUA8 1239 aa20.4■□□□□ 0.86
SNHG6-201ENST00000520348 G2E3Q7L622 706 aa20.39■□□□□ 0.85
SNHG6-201ENST00000520348 CHMP4BQ9H444 224 aaKnown RBP20.39■□□□□ 0.85
SNHG6-201ENST00000520348 CABP4P57796 275 aa20.38■□□□□ 0.85
SNHG6-201ENST00000520348 UNC5CLQ8IV45 518 aa20.38■□□□□ 0.85
SNHG6-201ENST00000520348 ZBTB7BO15156 539 aaPredicted RBP20.37■□□□□ 0.85
SNHG6-201ENST00000520348 FLIIQ13045 1269 aa20.37■□□□□ 0.85
SNHG6-201ENST00000520348 USP35Q9P2H5 1018 aa20.37■□□□□ 0.85
SNHG6-201ENST00000520348 PCDHB15Q9Y5E8 787 aa20.37■□□□□ 0.85
SNHG6-201ENST00000520348 VPS72Q15906 364 aa20.36■□□□□ 0.85
SNHG6-201ENST00000520348 ITGB4P16144 1822 aa20.35■□□□□ 0.85
SNHG6-201ENST00000520348 HSPA1LP34931 641 aa20.35■□□□□ 0.85
SNHG6-201ENST00000520348 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
SNHG6-201ENST00000520348 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
SNHG6-201ENST00000520348 DDX54Q8TDD1 881 aaKnown RBP20.34■□□□□ 0.85
SNHG6-201ENST00000520348 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
SNHG6-201ENST00000520348 EXOC5O00471 708 aa20.33■□□□□ 0.85
SNHG6-201ENST00000520348 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.85
SNHG6-201ENST00000520348 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
SNHG6-201ENST00000520348 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
SNHG6-201ENST00000520348 DBF4Q9UBU7 674 aaPredicted RBP20.33■□□□□ 0.85
SNHG6-201ENST00000520348 IGHDP01880 384 aa20.32■□□□□ 0.84
SNHG6-201ENST00000520348 CCT4P50991 539 aaKnown RBP20.32■□□□□ 0.84
SNHG6-201ENST00000520348 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
SNHG6-201ENST00000520348 BCL9O00512 1426 aa20.32■□□□□ 0.84
SNHG6-201ENST00000520348 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
SNHG6-201ENST00000520348 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
SNHG6-201ENST00000520348 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
SNHG6-201ENST00000520348 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
SNHG6-201ENST00000520348 PDIA6Q15084 440 aa20.31■□□□□ 0.84
SNHG6-201ENST00000520348 ERBB4Q15303 1308 aa20.3■□□□□ 0.84
SNHG6-201ENST00000520348 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
SNHG6-201ENST00000520348 EIF2S2P20042 333 aaKnown RBP20.3■□□□□ 0.84
SNHG6-201ENST00000520348 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
SNHG6-201ENST00000520348 DDX21Q9NR30 783 aaKnown RBP eCLIP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 238.4 ms