RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 MTHFSP49914 203 aa30.98■■■□□ 2.55
ERGIC1-206ENST00000519860 ITPK1Q13572 414 aa30.98■■■□□ 2.55
ERGIC1-206ENST00000519860 ATP6V1AP38606 617 aa30.97■■■□□ 2.55
ERGIC1-206ENST00000519860 KDM6AO15550 1401 aaPredicted RBP30.97■■■□□ 2.55
ERGIC1-206ENST00000519860 ERVV-2B6SEH9 535 aa30.96■■■□□ 2.55
ERGIC1-206ENST00000519860 NLGN2Q8NFZ4 835 aa30.96■■■□□ 2.55
ERGIC1-206ENST00000519860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.95■■■□□ 2.55
ERGIC1-206ENST00000519860 C1orf141Q5JVX7 400 aa30.95■■■□□ 2.55
ERGIC1-206ENST00000519860 PELP1Q8IZL8 1130 aaKnown RBP30.95■■■□□ 2.55
ERGIC1-206ENST00000519860 UBR3Q6ZT12 1888 aa30.95■■■□□ 2.54
ERGIC1-206ENST00000519860 KDRP35968 1356 aa30.94■■■□□ 2.54
ERGIC1-206ENST00000519860 GPR162Q16538 588 aa30.94■■■□□ 2.54
ERGIC1-206ENST00000519860 CABP4P57796 275 aa30.93■■■□□ 2.54
ERGIC1-206ENST00000519860 RBM42Q9BTD8 480 aaKnown RBP30.93■■■□□ 2.54
ERGIC1-206ENST00000519860 UTRNP46939 3433 aa30.93■■■□□ 2.54
ERGIC1-206ENST00000519860 GNPATO15228 680 aa30.92■■■□□ 2.54
ERGIC1-206ENST00000519860 HMOX1P09601 288 aa30.9■■■□□ 2.54
ERGIC1-206ENST00000519860 SSFA2P28290 1259 aa30.89■■■□□ 2.54
ERGIC1-206ENST00000519860 SLC4A9Q96Q91 983 aa30.89■■■□□ 2.54
ERGIC1-206ENST00000519860 NFATC2IPQ8NCF5 419 aa30.86■■■□□ 2.53
ERGIC1-206ENST00000519860 DIAPH1O60610 1272 aaKnown RBP30.84■■■□□ 2.53
ERGIC1-206ENST00000519860 PTCD1O75127 700 aaKnown RBP30.84■■■□□ 2.53
ERGIC1-206ENST00000519860 NPC1L1Q9UHC9 1359 aa30.81■■■□□ 2.52
ERGIC1-206ENST00000519860 AKAP4Q5JQC9 854 aa30.81■■■□□ 2.52
ERGIC1-206ENST00000519860 RTCBQ9Y3I0 505 aaKnown RBP30.8■■■□□ 2.52
ERGIC1-206ENST00000519860 CHD4Q14839 1912 aa30.8■■■□□ 2.52
ERGIC1-206ENST00000519860 GOLGB1Q14789 3259 aaKnown RBP30.8■■■□□ 2.52
ERGIC1-206ENST00000519860 ZNF831Q5JPB2 1677 aa30.79■■■□□ 2.52
ERGIC1-206ENST00000519860 YBX3P16989 372 aaKnown RBP eCLIP30.79■■■□□ 2.522e-6■□□□□ 10.4
ERGIC1-206ENST00000519860 CD2APQ9Y5K6 639 aa30.79■■■□□ 2.52
ERGIC1-206ENST00000519860 SCN11AQ9UI33 1791 aa30.79■■■□□ 2.52
ERGIC1-206ENST00000519860 ZNF784Q8NCA9 323 aaPredicted RBP30.78■■■□□ 2.52
ERGIC1-206ENST00000519860 LGR6Q9HBX8 967 aa30.78■■■□□ 2.52
ERGIC1-206ENST00000519860 COL5A3P25940 1745 aaPredicted RBP30.78■■■□□ 2.52
ERGIC1-206ENST00000519860 U2SURPO15042 1029 aaKnown RBP30.76■■■□□ 2.51
ERGIC1-206ENST00000519860 MTHFSDQ2M296 383 aaKnown RBP30.76■■■□□ 2.51
ERGIC1-206ENST00000519860 TRAPPC3LQ5T215 181 aa30.76■■■□□ 2.51
ERGIC1-206ENST00000519860 COL3A1P02461 1466 aaPredicted RBP30.76■■■□□ 2.51
ERGIC1-206ENST00000519860 CNTNAP4Q9C0A0 1308 aa30.75■■■□□ 2.51
ERGIC1-206ENST00000519860 RC3H1Q5TC82 1133 aaKnown RBP30.74■■■□□ 2.51
ERGIC1-206ENST00000519860 SLC52A2Q9HAB3 445 aa30.74■■■□□ 2.51
ERGIC1-206ENST00000519860 ARHGEF1Q92888 912 aaKnown RBP30.73■■■□□ 2.51
ERGIC1-206ENST00000519860 RNMTO43148 476 aaKnown RBP30.72■■■□□ 2.51
ERGIC1-206ENST00000519860 MMP10P09238 476 aa30.72■■■□□ 2.51
ERGIC1-206ENST00000519860 WWC3Q9ULE0 1092 aa30.72■■■□□ 2.51
ERGIC1-206ENST00000519860 RPS6KA4O75676 772 aa30.71■■■□□ 2.51
ERGIC1-206ENST00000519860 CRKLP46109 303 aaKnown RBP30.71■■■□□ 2.51
ERGIC1-206ENST00000519860 MYH14Q7Z406 1995 aaKnown RBP30.7■■■□□ 2.5
ERGIC1-206ENST00000519860 RFC4P35249 363 aa30.69■■■□□ 2.5
ERGIC1-206ENST00000519860 SLC39A6Q13433 755 aa30.69■■■□□ 2.5
ERGIC1-206ENST00000519860 TJP1Q07157 1748 aa30.69■■■□□ 2.5
ERGIC1-206ENST00000519860 GRIN3BO60391 1043 aa30.68■■■□□ 2.5
ERGIC1-206ENST00000519860 ADRA2BP18089 450 aa30.68■■■□□ 2.5
ERGIC1-206ENST00000519860 MRC1P22897 1456 aa30.68■■■□□ 2.5
ERGIC1-206ENST00000519860 VIRMAQ69YN4 1812 aaKnown RBP30.67■■■□□ 2.5
ERGIC1-206ENST00000519860 GYS1P13807 737 aa30.65■■■□□ 2.5
ERGIC1-206ENST00000519860 NLGN1Q8N2Q7 840 aa30.65■■■□□ 2.5
ERGIC1-206ENST00000519860 C4AP0C0L4 1744 aa30.64■■■□□ 2.5
ERGIC1-206ENST00000519860 DNAJC10Q8IXB1 793 aa30.64■■■□□ 2.5
ERGIC1-206ENST00000519860 CICQ96RK0 1608 aaPredicted RBP30.64■■■□□ 2.5
ERGIC1-206ENST00000519860 CFAP53Q96M91 514 aa30.63■■■□□ 2.49
ERGIC1-206ENST00000519860 ADAMTS7Q9UKP4 1686 aa30.62■■■□□ 2.49
ERGIC1-206ENST00000519860 INTS5Q6P9B9 1019 aaKnown RBP30.62■■■□□ 2.49
ERGIC1-206ENST00000519860 SRP68Q9UHB9 627 aaKnown RBP30.62■■■□□ 2.49
ERGIC1-206ENST00000519860 KCPQ6ZWJ8 1503 aa30.6■■■□□ 2.49
ERGIC1-206ENST00000519860 PPP2R1AP30153 589 aa30.59■■■□□ 2.49
ERGIC1-206ENST00000519860 CCDC87Q9NVE4 849 aa30.59■■■□□ 2.49
ERGIC1-206ENST00000519860 GAS2L2Q8NHY3 880 aa30.58■■■□□ 2.49
ERGIC1-206ENST00000519860 GNAT3A8MTJ3 354 aa30.57■■■□□ 2.48
ERGIC1-206ENST00000519860 PRKAR2BP31323 418 aa30.57■■■□□ 2.48
ERGIC1-206ENST00000519860 PARP3Q9Y6F1 533 aa30.57■■■□□ 2.48
ERGIC1-206ENST00000519860 USP42Q9H9J4 1324 aaKnown RBP30.56■■■□□ 2.48
ERGIC1-206ENST00000519860 CYP19A1P11511 503 aaPredicted RBP30.56■■■□□ 2.48
ERGIC1-206ENST00000519860 IL17REQ8NFR9 667 aa30.56■■■□□ 2.48
ERGIC1-206ENST00000519860 PHACTR3Q96KR7 559 aa30.56■■■□□ 2.48
ERGIC1-206ENST00000519860 RSPH6AQ9H0K4 717 aa30.55■■■□□ 2.48
ERGIC1-206ENST00000519860 PXDNLA1KZ92 1463 aa30.55■■■□□ 2.48
ERGIC1-206ENST00000519860 TEFQ10587 303 aa30.54■■■□□ 2.48
ERGIC1-206ENST00000519860 FKBP8Q14318 412 aa30.54■■■□□ 2.48
ERGIC1-206ENST00000519860 NUDCQ9Y266 331 aa30.54■■■□□ 2.48
ERGIC1-206ENST00000519860 C10orf71Q711Q0 1435 aa30.54■■■□□ 2.48
ERGIC1-206ENST00000519860 U2AF1L5P0DN76 240 aaPredicted RBP30.53■■■□□ 2.48
ERGIC1-206ENST00000519860 U2AF1Q01081 240 aaKnown RBP eCLIP30.53■■■□□ 2.48
ERGIC1-206ENST00000519860 TTC5Q8N0Z6 440 aa30.53■■■□□ 2.48
ERGIC1-206ENST00000519860 KIF13BQ9NQT8 1826 aa30.52■■■□□ 2.48
ERGIC1-206ENST00000519860 A0A0G2JLW4 131 aa30.52■■■□□ 2.48
ERGIC1-206ENST00000519860 N4BP2Q86UW6 1770 aaPredicted RBP30.51■■■□□ 2.48
ERGIC1-206ENST00000519860 SOS1Q07889 1333 aaPredicted RBP30.51■■■□□ 2.48
ERGIC1-206ENST00000519860 ZBTB1Q9Y2K1 713 aa30.51■■■□□ 2.47
ERGIC1-206ENST00000519860 UBR2Q8IWV8 1755 aa30.51■■■□□ 2.47
ERGIC1-206ENST00000519860 KIAA1551Q9HCM1 1747 aa30.5■■■□□ 2.47
ERGIC1-206ENST00000519860 TGFB2P61812 414 aa30.5■■■□□ 2.47
ERGIC1-206ENST00000519860 ZPR1O75312 459 aa30.49■■■□□ 2.47
ERGIC1-206ENST00000519860 DDR1Q08345 913 aa30.49■■■□□ 2.47
ERGIC1-206ENST00000519860 USPL1Q5W0Q7 1092 aa30.49■■■□□ 2.47
ERGIC1-206ENST00000519860 VSIG10Q8N0Z9 540 aa30.49■■■□□ 2.47
ERGIC1-206ENST00000519860 ZNF496Q96IT1 587 aaPredicted RBP30.48■■■□□ 2.47
ERGIC1-206ENST00000519860 COL15A1P39059 1388 aa30.47■■■□□ 2.47
ERGIC1-206ENST00000519860 DPEP1P16444 411 aa30.47■■■□□ 2.47
ERGIC1-206ENST00000519860 CANXP27824 592 aaKnown RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms