RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CBLBQ13191 982 aa5.63□□□□□ -1.51
SKP1-203ENST00000517625 MTFR1Q15390 333 aa5.63□□□□□ -1.51
SKP1-203ENST00000517625 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
SKP1-203ENST00000517625 ARHGEF10LQ9HCE6 1279 aa5.63□□□□□ -1.51
SKP1-203ENST00000517625 HRH3Q9Y5N1 445 aa5.63□□□□□ -1.51
SKP1-203ENST00000517625 A0A1W2PRU2 124 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 SFI1A8K8P3 1242 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 SPINT1O43278 529 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 GFRA3O60609 400 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 IL2RAP01589 272 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 EPHA4P54764 986 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 STAG2Q8N3U4 1231 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 KDF1Q8NAX2 398 aaPredicted RBP5.62□□□□□ -1.51
SKP1-203ENST00000517625 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
SKP1-203ENST00000517625 CNKSR1Q969H4 720 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 NLRP3Q96P20 1036 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
SKP1-203ENST00000517625 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 FOXO3O43524 673 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 IGFBP4P22692 258 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 GTF2E1P29083 439 aaPredicted RBP5.61□□□□□ -1.51
SKP1-203ENST00000517625 WEE1P30291 646 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 SMTNP53814 917 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 SCARF1Q14162 830 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 TLR1Q15399 786 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 MRPL14Q6P1L8 145 aaKnown RBP5.61□□□□□ -1.51
SKP1-203ENST00000517625 COL26A1Q96A83 441 aa5.61□□□□□ -1.51
SKP1-203ENST00000517625 A6NJY4 79 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 AXIN1O15169 862 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 ATP2B4P23634 1241 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 SSFA2P28290 1259 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 RNF144AP50876 292 aaPredicted RBP5.6□□□□□ -1.51
SKP1-203ENST00000517625 FOXK2Q01167 660 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 RELBQ01201 579 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 HINFPQ9BQA5 517 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 IRX2Q9BZI1 471 aaPredicted RBP5.6□□□□□ -1.51
SKP1-203ENST00000517625 FHDC1Q9C0D6 1143 aaPredicted RBP5.6□□□□□ -1.51
SKP1-203ENST00000517625 CXXC1Q9P0U4 656 aaPredicted RBP5.6□□□□□ -1.51
SKP1-203ENST00000517625 SCHIP1Q9P0W5 487 aaPredicted RBP5.6□□□□□ -1.51
SKP1-203ENST00000517625 CHMP3Q9Y3E7 222 aa5.6□□□□□ -1.51
SKP1-203ENST00000517625 MEN1O00255 615 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 HIRAP54198 1017 aaPredicted RBP5.59□□□□□ -1.51
SKP1-203ENST00000517625 PSMA6P60900 246 aaKnown RBP5.59□□□□□ -1.51
SKP1-203ENST00000517625 OCLNQ16625 522 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 WDR44Q5JSH3 913 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 POTEAQ6S8J7 498 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 TSEN2Q8NCE0 465 aaKnown RBP5.59□□□□□ -1.51
SKP1-203ENST00000517625 AGBL1Q96MI9 1066 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.512e-6■■■■■ 36.6
SKP1-203ENST00000517625 RAB6BQ9NRW1 208 aa5.59□□□□□ -1.51
SKP1-203ENST00000517625 ZBTB7CA1YPR0 619 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 PTCD1O75127 700 aaKnown RBP5.58□□□□□ -1.52
SKP1-203ENST00000517625 BMP2P12643 396 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 CENPCQ03188 943 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 GNASQ5JWF2 1037 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 PPARGC1BQ86YN6 1023 aaKnown RBP5.58□□□□□ -1.52
SKP1-203ENST00000517625 RHBDD1Q8TEB9 315 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 ZSCAN10Q96SZ4 725 aaPredicted RBP5.58□□□□□ -1.52
SKP1-203ENST00000517625 SERTAD1Q9UHV2 236 aa5.58□□□□□ -1.52
SKP1-203ENST00000517625 IQSEC3Q9UPP2 1182 aaPredicted RBP5.58□□□□□ -1.52
SKP1-203ENST00000517625 GNEQ9Y223 722 aaKnown RBP5.58□□□□□ -1.52
SKP1-203ENST00000517625 SPATA31C2B4DYI2 1134 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 ARID4AP29374 1257 aaPredicted RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 TEAD4Q15561 434 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 TAS1R3Q7RTX0 852 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 SLC9A9Q8IVB4 645 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 TNS4Q8IZW8 715 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 CCER1Q8TC90 406 aaPredicted RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 NIFKQ9BYG3 293 aaKnown RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 GRIP2Q9C0E4 1043 aa5.57□□□□□ -1.52
SKP1-203ENST00000517625 ZNF395Q9H8N7 513 aaPredicted RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 POLMQ9NP87 494 aaPredicted RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 GPC6Q9Y625 555 aaPredicted RBP5.57□□□□□ -1.52
SKP1-203ENST00000517625 ATAD2Q6PL18 1390 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 PRMT3O60678 531 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 SLC27A3Q5K4L6 730 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 TMEM214Q6NUQ4 689 aaKnown RBP5.56□□□□□ -1.52
SKP1-203ENST00000517625 RNF217Q8TC41 542 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 KIFC2Q96AC6 838 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 INSM2Q96T92 566 aaPredicted RBP5.56□□□□□ -1.52
SKP1-203ENST00000517625 TSPAN10Q9H1Z9 355 aaPredicted RBP5.56□□□□□ -1.52
SKP1-203ENST00000517625 SENP2Q9HC62 589 aa5.56□□□□□ -1.52
SKP1-203ENST00000517625 SOS2Q07890 1332 aaPredicted RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 TTLL8A6PVC2 850 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 C21orf2O43822 256 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 PPP1R12BO60237 982 aaPredicted RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 STAU1O95793 577 aaKnown RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 FOXD4L5Q5VV16 416 aaPredicted RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 PHLDB3Q6NSJ2 640 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 TRIM46Q7Z4K8 759 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 ZNF295-AS1Q8N0V1 137 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 SCG3Q8WXD2 468 aaKnown RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 VTI1AQ96AJ9 217 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 C2orf49Q9BVC5 232 aaPredicted RBP5.55□□□□□ -1.52
SKP1-203ENST00000517625 ATP13A2Q9NQ11 1180 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 AAASQ9NRG9 546 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 SLAIN2Q9P270 581 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
SKP1-203ENST00000517625 SERTM1A2A2V5 107 aa5.54□□□□□ -1.52
SKP1-203ENST00000517625 BMP1P13497 986 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms