RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 NDUFB9Q9Y6M9 179 aa4□□□□□ -1.77
RNU6-1299P-201ENST00000516316 PHF20L1A8MW92 1017 aa3.99□□□□□ -1.77
RNU6-1299P-201ENST00000516316 MX2P20592 715 aa3.99□□□□□ -1.77
RNU6-1299P-201ENST00000516316 PLA2G4EQ3MJ16 856 aa3.99□□□□□ -1.77
RNU6-1299P-201ENST00000516316 C1orf229Q6ZS94 237 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1299P-201ENST00000516316 CHIC2Q9UKJ5 165 aa3.99□□□□□ -1.77
RNU6-1299P-201ENST00000516316 MAP2K3P46734 347 aa3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 IRF5Q13568 498 aa3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 C4orf17Q53FE4 359 aa3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 NEDD1Q8NHV4 660 aa3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 KLRG1Q96E93 195 aa3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 OXCT2Q9BYC2 517 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1299P-201ENST00000516316 A0A1B0GTH6 734 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 SHISA8B8ZZ34 492 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 C2CD2LO14523 706 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 STAU1O95793 577 aaKnown RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 PROCP04070 461 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 HOXB4P17483 251 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 MSX1P28360 303 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 PHKA2P46019 1235 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 SNRPNP63162 240 aaKnown RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 LBRQ14739 615 aaKnown RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 ZSCAN10Q96SZ4 725 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 SPOCK3Q9BQ16 436 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 ESF1Q9H501 851 aaKnown RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 GPAMQ9HCL2 828 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 NDFIP2Q9NV92 336 aa3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 NSFL1CQ9UNZ2 370 aaKnown RBP3.97□□□□□ -1.77
RNU6-1299P-201ENST00000516316 MSTNO14793 375 aa3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 MYCP01106 439 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PODNQ7Z5L7 613 aa3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PPARGC1BQ86YN6 1023 aaKnown RBP3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ETNK1Q9HBU6 452 aa3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 TBC1D2BQ9UPU7 963 aa3.96□□□□□ -1.78
RNU6-1299P-201ENST00000516316 KRBA1A5PL33 1030 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 APBB1O00213 710 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 BNIP3LO60238 219 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ADAM23O75077 832 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SCNN1DP51172 638 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 CTBSQ01459 385 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 USP4Q13107 963 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ESCO1Q5FWF5 840 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GNASQ5JWF2 1037 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 TMEM214Q6NUQ4 689 aaKnown RBP3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 LINC00114Q6XXX2 140 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GALNT6Q8NCL4 622 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 RHBDD1Q8TEB9 315 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 CRISPLD1Q9H336 500 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 RUBCNLQ9H714 662 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 HCN2Q9UL51 889 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PHF24Q9UPV7 400 aa3.95□□□□□ -1.78
RNU6-1299P-201ENST00000516316 COL8A1P27658 744 aa3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 EIF4G2P78344 907 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ZNF295-AS1Q8N0V1 137 aa3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 EDARADDQ8WWZ3 215 aa3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 DNAAF2Q9NVR5 837 aaKnown RBP3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GDF2Q9UK05 429 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ATXN7L1Q9ULK2 861 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 DOLKQ9UPQ8 538 aa3.94□□□□□ -1.78
RNU6-1299P-201ENST00000516316 INHAP05111 366 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 CSB-PGBD3P0DP91 1061 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SLFNL1Q499Z3 407 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 RNF135Q8IUD6 432 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PGBD3Q8N328 593 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GOLGA6L1Q8N7Z2 621 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ABHD17AQ96GS6 310 aa3.93□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SLC24A1O60721 1099 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 BMP4P12644 408 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ATP4AP20648 1035 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 FGFR3P22607 806 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GTF2E1P29083 439 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 VAC14Q08AM6 782 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 TLR1Q15399 786 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 EFHC2Q5JST6 749 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SLCO4C1Q6ZQN7 724 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 BTBD6Q96KE9 485 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ZCCHC2Q9C0B9 1178 aaKnown RBP3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SUV39H2Q9H5I1 410 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GGA1Q9UJY5 639 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 MKL2Q9ULH7 1088 aa3.92□□□□□ -1.78
RNU6-1299P-201ENST00000516316 TMEM229AB2RXF0 380 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ARAFP10398 606 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 EPXP11678 715 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PLA2G4AP47712 749 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SMTNP53814 917 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 GDF10P55107 478 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 MAP7D1Q3KQU3 841 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 OXLD1Q5BKU9 147 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 ALYREFQ86V81 257 aaKnown RBP3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 NLRP8Q86W28 1048 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 C1orf216Q8TAB5 229 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SIRT1Q96EB6 747 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 SLC4A9Q96Q91 983 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 KLF15Q9UIH9 416 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 IQSEC3Q9UPP2 1182 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 PCDHGC4Q9Y5F7 938 aa3.91□□□□□ -1.78
RNU6-1299P-201ENST00000516316 CDK2AP1O14519 115 aa3.9□□□□□ -1.79
RNU6-1299P-201ENST00000516316 BAG6P46379 1132 aa3.9□□□□□ -1.79
RNU6-1299P-201ENST00000516316 DGKGP49619 791 aa3.9□□□□□ -1.79
RNU6-1299P-201ENST00000516316 TNP2Q05952 138 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms