RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
SNF8-214ENST00000515174 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
SNF8-214ENST00000515174 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
SNF8-214ENST00000515174 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
SNF8-214ENST00000515174 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
SNF8-214ENST00000515174 ERBB3P21860 1342 aa13.05□□□□□ -0.32
SNF8-214ENST00000515174 TRIM27P14373 513 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
SNF8-214ENST00000515174 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
SNF8-214ENST00000515174 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
SNF8-214ENST00000515174 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
SNF8-214ENST00000515174 MEGF6O75095 1541 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 RLBP1P12271 317 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 MCM10Q7L590 875 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNF8-214ENST00000515174 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
SNF8-214ENST00000515174 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.32
SNF8-214ENST00000515174 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
SNF8-214ENST00000515174 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
SNF8-214ENST00000515174 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.33
SNF8-214ENST00000515174 CHMP4AQ9BY43 222 aa13.02□□□□□ -0.33
SNF8-214ENST00000515174 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
SNF8-214ENST00000515174 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
SNF8-214ENST00000515174 YY1P25490 414 aa13.01□□□□□ -0.33
SNF8-214ENST00000515174 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
SNF8-214ENST00000515174 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
SNF8-214ENST00000515174 API5Q9BZZ5 524 aaKnown RBP13.01□□□□□ -0.33
SNF8-214ENST00000515174 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
SNF8-214ENST00000515174 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
SNF8-214ENST00000515174 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
SNF8-214ENST00000515174 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
SNF8-214ENST00000515174 ABCC4O15439 1325 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 PTPRCP08575 1304 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 WDR17Q8IZU2 1322 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 HOXB7P09629 217 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
SNF8-214ENST00000515174 ZBTB40Q9NUA8 1239 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 RBM19Q9Y4C8 960 aaKnown RBP12.98□□□□□ -0.33
SNF8-214ENST00000515174 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
SNF8-214ENST00000515174 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 TRIM37O94972 964 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 APBA3O96018 575 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
SNF8-214ENST00000515174 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
SNF8-214ENST00000515174 THSD7AQ9UPZ6 1657 aa12.96□□□□□ -0.33
SNF8-214ENST00000515174 IGHDP01880 384 aa12.96□□□□□ -0.33
SNF8-214ENST00000515174 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
SNF8-214ENST00000515174 TMEM57Q8N5G2 664 aa12.96□□□□□ -0.33
SNF8-214ENST00000515174 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
SNF8-214ENST00000515174 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
SNF8-214ENST00000515174 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
SNF8-214ENST00000515174 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
SNF8-214ENST00000515174 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
SNF8-214ENST00000515174 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
SNF8-214ENST00000515174 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
SNF8-214ENST00000515174 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
SNF8-214ENST00000515174 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
SNF8-214ENST00000515174 ITGB4P16144 1822 aa12.95□□□□□ -0.34
SNF8-214ENST00000515174 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
SNF8-214ENST00000515174 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
SNF8-214ENST00000515174 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
SNF8-214ENST00000515174 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
SNF8-214ENST00000515174 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
SNF8-214ENST00000515174 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
SNF8-214ENST00000515174 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
SNF8-214ENST00000515174 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
SNF8-214ENST00000515174 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
SNF8-214ENST00000515174 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
SNF8-214ENST00000515174 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
SNF8-214ENST00000515174 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
SNF8-214ENST00000515174 EVA1CP58658 441 aa12.92□□□□□ -0.34
SNF8-214ENST00000515174 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
SNF8-214ENST00000515174 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
SNF8-214ENST00000515174 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
SNF8-214ENST00000515174 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
SNF8-214ENST00000515174 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
SNF8-214ENST00000515174 TEFQ10587 303 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 MRC1P22897 1456 aa12.91□□□□□ -0.34
SNF8-214ENST00000515174 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
SNF8-214ENST00000515174 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
SNF8-214ENST00000515174 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms