RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, human

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-221	ENST00000514588	KNSTRN	Q9Y448	316 aa		32.94	■■■□□ 2.86
CCND3-221	ENST00000514588	ERVV-2	B6SEH9	535 aa		32.93	■■■□□ 2.86
CCND3-221	ENST00000514588	DCAF5	Q96JK2	942 aa		32.93	■■■□□ 2.86
CCND3-221	ENST00000514588	GOLGB1	Q14789	3259 aa	Known RBP	32.93	■■■□□ 2.86
CCND3-221	ENST00000514588	HSP90AB1	P08238	724 aa	Known RBP	32.92	■■■□□ 2.86
CCND3-221	ENST00000514588	AEBP1	Q8IUX7	1158 aa		32.92	■■■□□ 2.86
CCND3-221	ENST00000514588	GNPAT	O15228	680 aa		32.91	■■■□□ 2.86
CCND3-221	ENST00000514588	GRIN3B	O60391	1043 aa		32.91	■■■□□ 2.86
CCND3-221	ENST00000514588	AMOT	Q4VCS5	1084 aa		32.91	■■■□□ 2.86
CCND3-221	ENST00000514588	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.91	■■■□□ 2.86
CCND3-221	ENST00000514588	KDR	P35968	1356 aa		32.91	■■■□□ 2.86
CCND3-221	ENST00000514588	KDM6A	O15550	1401 aa	Predicted RBP	32.89	■■■□□ 2.86
CCND3-221	ENST00000514588	SLC4A9	Q96Q91	983 aa		32.88	■■■□□ 2.85
CCND3-221	ENST00000514588	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.87	■■■□□ 2.85
CCND3-221	ENST00000514588	KIF7	Q2M1P5	1343 aa		32.86	■■■□□ 2.85
CCND3-221	ENST00000514588	IL13	P35225	146 aa		32.85	■■■□□ 2.85
CCND3-221	ENST00000514588	SULT6B1	Q6IMI4	303 aa		32.85	■■■□□ 2.85
CCND3-221	ENST00000514588	CABP4	P57796	275 aa		32.84	■■■□□ 2.85
CCND3-221	ENST00000514588	RBM42	Q9BTD8	480 aa	Known RBP	32.84	■■■□□ 2.85
CCND3-221	ENST00000514588	ZNF831	Q5JPB2	1677 aa		32.82	■■■□□ 2.84
CCND3-221	ENST00000514588	MTHFS	P49914	203 aa		32.82	■■■□□ 2.84
CCND3-221	ENST00000514588	C1orf141	Q5JVX7	400 aa		32.81	■■■□□ 2.84
CCND3-221	ENST00000514588	RTCB	Q9Y3I0	505 aa	Known RBP	32.79	■■■□□ 2.84
CCND3-221	ENST00000514588	RC3H1	Q5TC82	1133 aa	Known RBP	32.78	■■■□□ 2.84
CCND3-221	ENST00000514588	C1QTNF8	P60827	252 aa		32.77	■■■□□ 2.84
CCND3-221	ENST00000514588	TRAPPC3L	Q5T215	181 aa		32.77	■■■□□ 2.84
CCND3-221	ENST00000514588	CNTNAP4	Q9C0A0	1308 aa		32.77	■■■□□ 2.84
CCND3-221	ENST00000514588	NFATC2IP	Q8NCF5	419 aa		32.76	■■■□□ 2.83
CCND3-221	ENST00000514588	COL5A3	P25940	1745 aa	Predicted RBP	32.75	■■■□□ 2.83
CCND3-221	ENST00000514588	MMP10	P09238	476 aa		32.75	■■■□□ 2.83
CCND3-221	ENST00000514588	PER1	O15534	1290 aa	Predicted RBP	32.74	■■■□□ 2.83
CCND3-221	ENST00000514588	PTCD1	O75127	700 aa	Known RBP	32.73	■■■□□ 2.83
CCND3-221	ENST00000514588	ADRA2B	P18089	450 aa		32.73	■■■□□ 2.83
CCND3-221	ENST00000514588	ARHGEF1	Q92888	912 aa	Known RBP	32.73	■■■□□ 2.83
CCND3-221	ENST00000514588	RPS6KA4	O75676	772 aa		32.72	■■■□□ 2.83
CCND3-221	ENST00000514588	WWC3	Q9ULE0	1092 aa		32.72	■■■□□ 2.83
CCND3-221	ENST00000514588	GIGYF1	O75420	1035 aa	Predicted RBP	32.71	■■■□□ 2.83
CCND3-221	ENST00000514588	NLGN1	Q8N2Q7	840 aa		32.71	■■■□□ 2.83
CCND3-221	ENST00000514588	AKAP4	Q5JQC9	854 aa		32.69	■■■□□ 2.82
CCND3-221	ENST00000514588	MYH14	Q7Z406	1995 aa	Known RBP	32.68	■■■□□ 2.82
CCND3-221	ENST00000514588	GYS1	P13807	737 aa		32.67	■■■□□ 2.82
CCND3-221	ENST00000514588	RFC4	P35249	363 aa		32.67	■■■□□ 2.82
CCND3-221	ENST00000514588	CC2D1B	Q5T0F9	858 aa	Known RBP	32.67	■■■□□ 2.82
CCND3-221	ENST00000514588	SCN11A	Q9UI33	1791 aa		32.67	■■■□□ 2.82
CCND3-221	ENST00000514588	ATP10D	Q9P241	1426 aa		32.67	■■■□□ 2.82
CCND3-221	ENST00000514588	HMOX1	P09601	288 aa		32.66	■■■□□ 2.82
CCND3-221	ENST00000514588	CRKL	P46109	303 aa	Known RBP	32.66	■■■□□ 2.82
CCND3-221	ENST00000514588	CIC	Q96RK0	1608 aa	Predicted RBP	32.66	■■■□□ 2.82
CCND3-221	ENST00000514588	SENP3-EIF4A1	A0A087X0R7	540 aa		32.64	■■■□□ 2.82
CCND3-221	ENST00000514588	TJP1	Q07157	1748 aa		32.63	■■■□□ 2.81
CCND3-221	ENST00000514588	PXDNL	A1KZ92	1463 aa		32.63	■■■□□ 2.81
CCND3-221	ENST00000514588	SLC52A2	Q9HAB3	445 aa		32.63	■■■□□ 2.81
CCND3-221	ENST00000514588	LGR6	Q9HBX8	967 aa		32.63	■■■□□ 2.81
CCND3-221	ENST00000514588	KIF13B	Q9NQT8	1826 aa		32.63	■■■□□ 2.81
CCND3-221	ENST00000514588	ADCY9	O60503	1353 aa		32.62	■■■□□ 2.81
CCND3-221	ENST00000514588	DIAPH1	O60610	1272 aa	Known RBP	32.62	■■■□□ 2.81
CCND3-221	ENST00000514588	C4A	P0C0L4	1744 aa		32.62	■■■□□ 2.81
CCND3-221	ENST00000514588	C10orf71	Q711Q0	1435 aa		32.61	■■■□□ 2.81
CCND3-221	ENST00000514588	TGFB2	P61812	414 aa		32.6	■■■□□ 2.81
CCND3-221	ENST00000514588	KIAA1551	Q9HCM1	1747 aa		32.6	■■■□□ 2.81
CCND3-221	ENST00000514588	RNMT	O43148	476 aa	Known RBP	32.59	■■■□□ 2.81
CCND3-221	ENST00000514588	MTHFSD	Q2M296	383 aa	Known RBP	32.59	■■■□□ 2.81
CCND3-221	ENST00000514588	MRC1	P22897	1456 aa		32.59	■■■□□ 2.81
CCND3-221	ENST00000514588	INTS5	Q6P9B9	1019 aa	Known RBP	32.58	■■■□□ 2.81
CCND3-221	ENST00000514588	CCDC87	Q9NVE4	849 aa		32.58	■■■□□ 2.81
CCND3-221	ENST00000514588	SRP68	Q9UHB9	627 aa	Known RBP	32.58	■■■□□ 2.81
CCND3-221	ENST00000514588	PARP3	Q9Y6F1	533 aa		32.58	■■■□□ 2.81
CCND3-221	ENST00000514588	NPC1L1	Q9UHC9	1359 aa		32.58	■■■□□ 2.81
CCND3-221	ENST00000514588		A0A0G2JLW4	131 aa		32.57	■■■□□ 2.8
CCND3-221	ENST00000514588	DNAJC10	Q8IXB1	793 aa		32.56	■■■□□ 2.8
CCND3-221	ENST00000514588	USP42	Q9H9J4	1324 aa	Known RBP	32.55	■■■□□ 2.8
CCND3-221	ENST00000514588	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.55	■■■□□ 2.8
CCND3-221	ENST00000514588	SLC39A6	Q13433	755 aa		32.54	■■■□□ 2.8
CCND3-221	ENST00000514588	FKBP8	Q14318	412 aa		32.54	■■■□□ 2.8
CCND3-221	ENST00000514588	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.54	■■■□□ 2.8
CCND3-221	ENST00000514588	COL3A1	P02461	1466 aa	Predicted RBP	32.54	■■■□□ 2.8
CCND3-221	ENST00000514588	CNGB1	Q14028	1251 aa	Predicted RBP	32.53	■■■□□ 2.8
CCND3-221	ENST00000514588	ADAMTS7	Q9UKP4	1686 aa		32.53	■■■□□ 2.8
CCND3-221	ENST00000514588	DPEP1	P16444	411 aa		32.52	■■■□□ 2.8
CCND3-221	ENST00000514588	ZNF526	Q8TF50	670 aa	Predicted RBP	32.51	■■■□□ 2.79
CCND3-221	ENST00000514588	BCS1L	Q9Y276	419 aa		32.51	■■■□□ 2.79
CCND3-221	ENST00000514588	KCP	Q6ZWJ8	1503 aa		32.51	■■■□□ 2.79
CCND3-221	ENST00000514588	CYP19A1	P11511	503 aa	Predicted RBP	32.5	■■■□□ 2.79
CCND3-221	ENST00000514588	DDR1	Q08345	913 aa		32.49	■■■□□ 2.79
CCND3-221	ENST00000514588	VIRMA	Q69YN4	1812 aa	Known RBP	32.49	■■■□□ 2.79
CCND3-221	ENST00000514588	SOS1	Q07889	1333 aa	Predicted RBP	32.48	■■■□□ 2.79
CCND3-221	ENST00000514588	U2SURP	O15042	1029 aa	Known RBP	32.47	■■■□□ 2.79
CCND3-221	ENST00000514588	KCNA3	P22001	575 aa		32.45	■■■□□ 2.79
CCND3-221	ENST00000514588	FCHSD2	O94868	740 aa		32.44	■■■□□ 2.78
CCND3-221	ENST00000514588	TM4SF1	P30408	202 aa		32.44	■■■□□ 2.78
CCND3-221	ENST00000514588	VSIG10	Q8N0Z9	540 aa		32.44	■■■□□ 2.78
CCND3-221	ENST00000514588	ZPR1	O75312	459 aa		32.43	■■■□□ 2.78
CCND3-221	ENST00000514588	USPL1	Q5W0Q7	1092 aa		32.43	■■■□□ 2.78
CCND3-221	ENST00000514588	BRCA1	P38398	1863 aa	Known RBP	32.42	■■■□□ 2.78
CCND3-221	ENST00000514588	POLRMT	O00411	1230 aa	Known RBP	32.42	■■■□□ 2.78
CCND3-221	ENST00000514588	ARHGAP27	Q6ZUM4	889 aa		32.42	■■■□□ 2.78
CCND3-221	ENST00000514588	ZBTB1	Q9Y2K1	713 aa		32.42	■■■□□ 2.78
CCND3-221	ENST00000514588	IL17RE	Q8NFR9	667 aa		32.4	■■■□□ 2.78
CCND3-221	ENST00000514588	COL15A1	P39059	1388 aa		32.4	■■■□□ 2.78
CCND3-221	ENST00000514588	UBR2	Q8IWV8	1755 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms