RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
LINC01088-205ENST00000509088 BCRP11274 1271 aa10.42□□□□□ -0.74
LINC01088-205ENST00000509088 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.745e-7■■■■□ 24
LINC01088-205ENST00000509088 SUZ12Q15022 739 aaKnown RBP10.42□□□□□ -0.74
LINC01088-205ENST00000509088 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
LINC01088-205ENST00000509088 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
LINC01088-205ENST00000509088 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
LINC01088-205ENST00000509088 MX2P20592 715 aa10.41□□□□□ -0.74
LINC01088-205ENST00000509088 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
LINC01088-205ENST00000509088 TRERF1Q96PN7 1200 aa10.41□□□□□ -0.74
LINC01088-205ENST00000509088 CNTNAP5Q8WYK1 1306 aa10.4□□□□□ -0.74
LINC01088-205ENST00000509088 A0A1B0GTH6 734 aa10.4□□□□□ -0.74
LINC01088-205ENST00000509088 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
LINC01088-205ENST00000509088 SCNN1DP51172 638 aa10.4□□□□□ -0.74
LINC01088-205ENST00000509088 SLFNL1Q499Z3 407 aa10.39□□□□□ -0.75
LINC01088-205ENST00000509088 CFHR5Q9BXR6 569 aa10.39□□□□□ -0.75
LINC01088-205ENST00000509088 ITGB2P05107 769 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 MSX1P28360 303 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 USP4Q13107 963 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 OXLD1Q5BKU9 147 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 ESCO1Q5FWF5 840 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
LINC01088-205ENST00000509088 RUBCNLQ9H714 662 aa10.38□□□□□ -0.75
LINC01088-205ENST00000509088 MCM6Q14566 821 aa10.37□□□□□ -0.75
LINC01088-205ENST00000509088 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
LINC01088-205ENST00000509088 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
LINC01088-205ENST00000509088 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
LINC01088-205ENST00000509088 ENAMQ9NRM1 1142 aa10.37□□□□□ -0.75
LINC01088-205ENST00000509088 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
LINC01088-205ENST00000509088 OIP5O43482 229 aa10.36□□□□□ -0.75
LINC01088-205ENST00000509088 GNASQ5JWF2 1037 aa10.36□□□□□ -0.75
LINC01088-205ENST00000509088 GPAT2Q6NUI2 795 aa10.36□□□□□ -0.75
LINC01088-205ENST00000509088 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
LINC01088-205ENST00000509088 NDFIP2Q9NV92 336 aa10.36□□□□□ -0.75
LINC01088-205ENST00000509088 SHISA8B8ZZ34 492 aa10.35□□□□□ -0.75
LINC01088-205ENST00000509088 ABL2P42684 1182 aa10.35□□□□□ -0.75
LINC01088-205ENST00000509088 TLR1Q15399 786 aa10.35□□□□□ -0.75
LINC01088-205ENST00000509088 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
LINC01088-205ENST00000509088 PRM3Q9NNZ6 103 aa10.35□□□□□ -0.75
LINC01088-205ENST00000509088 C2CD2LO14523 706 aa10.34□□□□□ -0.75
LINC01088-205ENST00000509088 LBRQ14739 615 aaKnown RBP10.34□□□□□ -0.75
LINC01088-205ENST00000509088 PLPP7Q8NBV4 271 aa10.34□□□□□ -0.75
LINC01088-205ENST00000509088 KLRG1Q96E93 195 aa10.34□□□□□ -0.75
LINC01088-205ENST00000509088 HCN2Q9UL51 889 aa10.34□□□□□ -0.75
LINC01088-205ENST00000509088 INHAP05111 366 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 ATP4AP20648 1035 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 MAP2K3P46734 347 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 GDF10P55107 478 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 CRISPLD1Q9H336 500 aa10.33□□□□□ -0.76
LINC01088-205ENST00000509088 DNAAF2Q9NVR5 837 aaKnown RBP10.33□□□□□ -0.76
LINC01088-205ENST00000509088 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
LINC01088-205ENST00000509088 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
LINC01088-205ENST00000509088 NEDD1Q8NHV4 660 aa10.32□□□□□ -0.76
LINC01088-205ENST00000509088 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
LINC01088-205ENST00000509088 SNRPNP63162 240 aaKnown RBP10.31□□□□□ -0.76
LINC01088-205ENST00000509088 WASHC4Q2M389 1173 aa10.31□□□□□ -0.76
LINC01088-205ENST00000509088 ABHD17AQ96GS6 310 aa10.31□□□□□ -0.76
LINC01088-205ENST00000509088 USP3Q9Y6I4 520 aa10.31□□□□□ -0.76
LINC01088-205ENST00000509088 BNIP3LO60238 219 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 IGHA1P01876 353 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 HOXB4P17483 251 aaPredicted RBP10.3□□□□□ -0.76
LINC01088-205ENST00000509088 PLA2G4AP47712 749 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 PLA2G4EQ3MJ16 856 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
LINC01088-205ENST00000509088 ATXN7L1Q9ULK2 861 aaPredicted RBP10.3□□□□□ -0.76
LINC01088-205ENST00000509088 IQSEC3Q9UPP2 1182 aaPredicted RBP10.3□□□□□ -0.76
LINC01088-205ENST00000509088 COG6Q9Y2V7 657 aa10.3□□□□□ -0.76
LINC01088-205ENST00000509088 PHF20L1A8MW92 1017 aa10.29□□□□□ -0.76
LINC01088-205ENST00000509088 FOXK2Q01167 660 aa10.29□□□□□ -0.76
LINC01088-205ENST00000509088 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
LINC01088-205ENST00000509088 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
LINC01088-205ENST00000509088 CSB-PGBD3P0DP91 1061 aa10.28□□□□□ -0.76
LINC01088-205ENST00000509088 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
LINC01088-205ENST00000509088 SMTNP53814 917 aa10.28□□□□□ -0.76
LINC01088-205ENST00000509088 CTBSQ01459 385 aa10.28□□□□□ -0.76
LINC01088-205ENST00000509088 PGBD3Q8N328 593 aa10.28□□□□□ -0.76
LINC01088-205ENST00000509088 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
LINC01088-205ENST00000509088 MTFR1Q15390 333 aa10.27□□□□□ -0.77
LINC01088-205ENST00000509088 EFHC2Q5JST6 749 aa10.27□□□□□ -0.77
LINC01088-205ENST00000509088 SLC4A9Q96Q91 983 aa10.27□□□□□ -0.77
LINC01088-205ENST00000509088 FGFR3P22607 806 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 SOX11P35716 441 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 SEMA3FQ13275 785 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 TBC1D9Q6ZT07 1266 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 GALNT6Q8NCL4 622 aa10.26□□□□□ -0.77
LINC01088-205ENST00000509088 PROCP04070 461 aa10.25□□□□□ -0.77
LINC01088-205ENST00000509088 ZCCHC2Q9C0B9 1178 aaKnown RBP10.25□□□□□ -0.77
LINC01088-205ENST00000509088 ALG2Q9H553 416 aa10.25□□□□□ -0.77
LINC01088-205ENST00000509088 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
LINC01088-205ENST00000509088 EDARADDQ8WWZ3 215 aa10.24□□□□□ -0.77
LINC01088-205ENST00000509088 SPOCK3Q9BQ16 436 aa10.24□□□□□ -0.77
LINC01088-205ENST00000509088 NIFKQ9BYG3 293 aaKnown RBP10.24□□□□□ -0.77
LINC01088-205ENST00000509088 GDF2Q9UK05 429 aaPredicted RBP10.24□□□□□ -0.77
LINC01088-205ENST00000509088 BMP4P12644 408 aa10.23□□□□□ -0.77
LINC01088-205ENST00000509088 COL8A1P27658 744 aa10.23□□□□□ -0.77
LINC01088-205ENST00000509088 SLCO4C1Q6ZQN7 724 aa10.23□□□□□ -0.77
LINC01088-205ENST00000509088 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms