RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
SH3RF1-203ENST00000508685 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
SH3RF1-203ENST00000508685 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
SH3RF1-203ENST00000508685 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
SH3RF1-203ENST00000508685 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
SH3RF1-203ENST00000508685 G2E3Q7L622 706 aa13.77□□□□□ -0.21
SH3RF1-203ENST00000508685 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
SH3RF1-203ENST00000508685 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
SH3RF1-203ENST00000508685 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 ANTXR1Q9H6X2 564 aa13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 NLRP2Q9NX02 1062 aa13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 JCADQ9P266 1359 aa13.76□□□□□ -0.21
SH3RF1-203ENST00000508685 COL18A1P39060 1754 aa13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 PTPRCP08575 1304 aa13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 AMOTQ4VCS5 1084 aa13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
SH3RF1-203ENST00000508685 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 INTS3Q68E01 1043 aaKnown RBP13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 F6X3S4 739 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 SIRT2Q8IXJ6 389 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
SH3RF1-203ENST00000508685 TEFQ10587 303 aa13.73□□□□□ -0.21
SH3RF1-203ENST00000508685 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
SH3RF1-203ENST00000508685 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
SH3RF1-203ENST00000508685 KCNQ3O43525 872 aa13.73□□□□□ -0.21
SH3RF1-203ENST00000508685 MEGF6O75095 1541 aa13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 CCDC30Q5VVM6 783 aa13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 SLC4A10Q6U841 1118 aa13.72□□□□□ -0.21
SH3RF1-203ENST00000508685 CPDO75976 1380 aa13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 BTBD11A6QL63 1104 aa13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 EIF4A1P60842 406 aaKnown RBP13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 FLIIQ13045 1269 aa13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.21
SH3RF1-203ENST00000508685 NUCB1Q02818 461 aa13.71□□□□□ -0.22
SH3RF1-203ENST00000508685 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.22
SH3RF1-203ENST00000508685 GCC1Q96CN9 775 aa13.71□□□□□ -0.22
SH3RF1-203ENST00000508685 MEIS3Q99687 375 aa13.71□□□□□ -0.22
SH3RF1-203ENST00000508685 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.22
SH3RF1-203ENST00000508685 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
SH3RF1-203ENST00000508685 SPATA31A6Q5VVP1 1343 aa13.7□□□□□ -0.22
SH3RF1-203ENST00000508685 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
SH3RF1-203ENST00000508685 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 ABCC6O95255 1503 aa13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 SOS1Q07889 1333 aaPredicted RBP13.69□□□□□ -0.22
SH3RF1-203ENST00000508685 OVOS2A0A0G2JMS6 1433 aa13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 RBM25P49756 843 aaKnown RBP13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 HSCBQ8IWL3 235 aa13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 SNX21Q969T3 373 aa13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
SH3RF1-203ENST00000508685 KDM6AO15550 1401 aaPredicted RBP13.67□□□□□ -0.22
SH3RF1-203ENST00000508685 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
SH3RF1-203ENST00000508685 BMP2KLQ5H9B9 411 aa13.67□□□□□ -0.22
SH3RF1-203ENST00000508685 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
SH3RF1-203ENST00000508685 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
SH3RF1-203ENST00000508685 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 PHKG2P15735 406 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 ABCA3Q99758 1704 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 MCM4P33991 863 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-203ENST00000508685 ANXA1P04083 346 aa13.65□□□□□ -0.22
SH3RF1-203ENST00000508685 HOXB7P09629 217 aa13.65□□□□□ -0.22
SH3RF1-203ENST00000508685 PTMSP20962 102 aa13.65□□□□□ -0.22
SH3RF1-203ENST00000508685 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
SH3RF1-203ENST00000508685 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
SH3RF1-203ENST00000508685 CYP27B1O15528 508 aa13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 MEX3CQ5U5Q3 659 aaKnown RBP13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 ANKRD44Q8N8A2 993 aa13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
SH3RF1-203ENST00000508685 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
SH3RF1-203ENST00000508685 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
SH3RF1-203ENST00000508685 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms