RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CFHR5Q9BXR6 569 aa6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 NOP53Q9NZM5 478 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-208ENST00000505553 GNB5O14775 395 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 AMPD1P23109 780 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 RAB15P59190 212 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 PHF24Q9UPV7 400 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
TRAPPC13-208ENST00000505553 ERVH48-1M5A8F1 160 aa6.77□□□□□ -1.33
TRAPPC13-208ENST00000505553 ITGB7P26010 798 aa6.77□□□□□ -1.33
TRAPPC13-208ENST00000505553 KLRG1Q96E93 195 aa6.77□□□□□ -1.33
TRAPPC13-208ENST00000505553 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.33
TRAPPC13-208ENST00000505553 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 LINC00114Q6XXX2 140 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 LRRN4Q8WUT4 740 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 POM121Q96HA1 1249 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 SUV39H2Q9H5I1 410 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 DOC2BQ14184 412 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 SLC27A3Q5K4L6 730 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 COG6Q9Y2V7 657 aa6.76□□□□□ -1.33
TRAPPC13-208ENST00000505553 MEN1O00255 615 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 AP1G2O75843 785 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 F11P03951 625 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 CHRNA4P43681 627 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 POU4F2Q12837 409 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 WDR44Q5JSH3 913 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-208ENST00000505553 RFC5P40937 340 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 NR6A1Q15406 480 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 C1orf229Q6ZS94 237 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 NBPF11Q86T75 865 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 DZIP3Q86Y13 1208 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 PNMA1Q8ND90 353 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 PRM3Q9NNZ6 103 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
TRAPPC13-208ENST00000505553 GATA4P43694 442 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 TIMMDC1Q9NPL8 285 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 CYLDQ9NQC7 956 aa6.73□□□□□ -1.33
TRAPPC13-208ENST00000505553 ESPNB1AK53 854 aa6.71□□□□□ -1.34
TRAPPC13-208ENST00000505553 PDE4CQ08493 712 aa6.71□□□□□ -1.34
TRAPPC13-208ENST00000505553 ARTNQ5T4W7 220 aa6.71□□□□□ -1.34
TRAPPC13-208ENST00000505553 SLCO4C1Q6ZQN7 724 aa6.71□□□□□ -1.34
TRAPPC13-208ENST00000505553 SNRKQ9NRH2 765 aa6.71□□□□□ -1.34
TRAPPC13-208ENST00000505553 A0A1W2PRU2 124 aa6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 SPATA31C2B4DYI2 1134 aa6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 SOCS7O14512 581 aa6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 PPP1R15AO75807 674 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 HOXB4P17483 251 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 FBXO31Q5XUX0 539 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 TAS1R3Q7RTX0 852 aa6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 OCSTAMPQ9BR26 566 aa6.7□□□□□ -1.34
TRAPPC13-208ENST00000505553 BMP4P12644 408 aa6.69□□□□□ -1.34
TRAPPC13-208ENST00000505553 BTBD6Q96KE9 485 aa6.69□□□□□ -1.34
TRAPPC13-208ENST00000505553 GRIP2Q9C0E4 1043 aa6.69□□□□□ -1.34
TRAPPC13-208ENST00000505553 GOLGA2P5Q9HBQ8 144 aa6.69□□□□□ -1.34
TRAPPC13-208ENST00000505553 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
TRAPPC13-208ENST00000505553 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-208ENST00000505553 LBRQ14739 615 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-208ENST00000505553 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
TRAPPC13-208ENST00000505553 ACIN1Q9UKV3 1341 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-208ENST00000505553 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 DGKGP49619 791 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 GGA1Q9UJY5 639 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 RSPO4Q2I0M5 234 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 EPS8L1Q8TE68 723 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 CALR3Q96L12 384 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-208ENST00000505553 EPXP11678 715 aa6.66□□□□□ -1.34
TRAPPC13-208ENST00000505553 CLN3Q13286 438 aa6.66□□□□□ -1.34
TRAPPC13-208ENST00000505553 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
TRAPPC13-208ENST00000505553 MTMR14Q8NCE2 650 aa6.66□□□□□ -1.34
TRAPPC13-208ENST00000505553 CSB-PGBD3P0DP91 1061 aa6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 FOXD4L6Q3SYB3 417 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 CYP2U1Q7Z449 544 aa6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 PGBD3Q8N328 593 aa6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 GPAMQ9HCL2 828 aa6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 HMX1Q9NP08 348 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-208ENST00000505553 A0A1B0GTH6 734 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 PATL2C9JE40 543 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 SPATA31C1P0DKV0 1188 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 NKAPLQ5M9Q1 402 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 RNF135Q8IUD6 432 aa6.64□□□□□ -1.35
TRAPPC13-208ENST00000505553 THBS1P07996 1170 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms