RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 NLGN2Q8NFZ4 835 aa30.85■■■□□ 2.53
CDC42SE2-207ENST00000504701 AK7Q96M32 723 aa30.85■■■□□ 2.53
CDC42SE2-207ENST00000504701 SLC4A9Q96Q91 983 aa30.84■■■□□ 2.53
CDC42SE2-207ENST00000504701 ATP6V1AP38606 617 aa30.82■■■□□ 2.52
CDC42SE2-207ENST00000504701 DCAF5Q96JK2 942 aa30.82■■■□□ 2.52
CDC42SE2-207ENST00000504701 AMOTQ4VCS5 1084 aa30.81■■■□□ 2.52
CDC42SE2-207ENST00000504701 ERVV-2B6SEH9 535 aa30.8■■■□□ 2.52
CDC42SE2-207ENST00000504701 HMOX1P09601 288 aa30.8■■■□□ 2.52
CDC42SE2-207ENST00000504701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.79■■■□□ 2.52
CDC42SE2-207ENST00000504701 SCN11AQ9UI33 1791 aa30.79■■■□□ 2.52
CDC42SE2-207ENST00000504701 HSP90AB1P08238 724 aaKnown RBP30.78■■■□□ 2.52
CDC42SE2-207ENST00000504701 COL5A3P25940 1745 aaPredicted RBP30.78■■■□□ 2.52
CDC42SE2-207ENST00000504701 GOLGB1Q14789 3259 aaKnown RBP30.78■■■□□ 2.52
CDC42SE2-207ENST00000504701 RBM42Q9BTD8 480 aaKnown RBP30.77■■■□□ 2.52
CDC42SE2-207ENST00000504701 VIRMAQ69YN4 1812 aaKnown RBP30.77■■■□□ 2.52
CDC42SE2-207ENST00000504701 COL3A1P02461 1466 aaPredicted RBP30.76■■■□□ 2.52
CDC42SE2-207ENST00000504701 GNPATO15228 680 aa30.76■■■□□ 2.51
CDC42SE2-207ENST00000504701 CABP4P57796 275 aa30.76■■■□□ 2.51
CDC42SE2-207ENST00000504701 C1orf141Q5JVX7 400 aa30.76■■■□□ 2.51
CDC42SE2-207ENST00000504701 FLAD1Q8NFF5 587 aa30.76■■■□□ 2.51
CDC42SE2-207ENST00000504701 ZNF831Q5JPB2 1677 aa30.74■■■□□ 2.51
CDC42SE2-207ENST00000504701 CHD4Q14839 1912 aa30.73■■■□□ 2.51
CDC42SE2-207ENST00000504701 PELP1Q8IZL8 1130 aaKnown RBP30.73■■■□□ 2.51
CDC42SE2-207ENST00000504701 SSFA2P28290 1259 aa30.72■■■□□ 2.51
CDC42SE2-207ENST00000504701 GPR162Q16538 588 aa30.72■■■□□ 2.51
CDC42SE2-207ENST00000504701 NFATC2IPQ8NCF5 419 aa30.72■■■□□ 2.51
CDC42SE2-207ENST00000504701 MYH14Q7Z406 1995 aaKnown RBP30.72■■■□□ 2.51
CDC42SE2-207ENST00000504701 NPC1L1Q9UHC9 1359 aa30.71■■■□□ 2.51
CDC42SE2-207ENST00000504701 DIAPH1O60610 1272 aaKnown RBP30.71■■■□□ 2.51
CDC42SE2-207ENST00000504701 LGR6Q9HBX8 967 aa30.7■■■□□ 2.51
CDC42SE2-207ENST00000504701 TJP1Q07157 1748 aa30.7■■■□□ 2.5
CDC42SE2-207ENST00000504701 PTCD1O75127 700 aaKnown RBP30.69■■■□□ 2.5
CDC42SE2-207ENST00000504701 HMGB2P26583 209 aaKnown RBP30.67■■■□□ 2.5
CDC42SE2-207ENST00000504701 AKAP4Q5JQC9 854 aa30.67■■■□□ 2.5
CDC42SE2-207ENST00000504701 YBX3P16989 372 aaKnown RBP eCLIP30.66■■■□□ 2.5
CDC42SE2-207ENST00000504701 MTHFSDQ2M296 383 aaKnown RBP30.66■■■□□ 2.5
CDC42SE2-207ENST00000504701 C4AP0C0L4 1744 aa30.64■■■□□ 2.5
CDC42SE2-207ENST00000504701 ADAMTS7Q9UKP4 1686 aa30.64■■■□□ 2.5
CDC42SE2-207ENST00000504701 MRC1P22897 1456 aa30.63■■■□□ 2.49
CDC42SE2-207ENST00000504701 RNMTO43148 476 aaKnown RBP30.62■■■□□ 2.49
CDC42SE2-207ENST00000504701 U2SURPO15042 1029 aaKnown RBP30.61■■■□□ 2.49
CDC42SE2-207ENST00000504701 SLC52A2Q9HAB3 445 aa30.61■■■□□ 2.49
CDC42SE2-207ENST00000504701 WWC3Q9ULE0 1092 aa30.61■■■□□ 2.49
CDC42SE2-207ENST00000504701 RTCBQ9Y3I0 505 aaKnown RBP30.61■■■□□ 2.49
CDC42SE2-207ENST00000504701 CNTNAP4Q9C0A0 1308 aa30.61■■■□□ 2.49
CDC42SE2-207ENST00000504701 SLC39A6Q13433 755 aa30.6■■■□□ 2.49
CDC42SE2-207ENST00000504701 ZNF784Q8NCA9 323 aaPredicted RBP30.6■■■□□ 2.49
CDC42SE2-207ENST00000504701 CICQ96RK0 1608 aaPredicted RBP30.6■■■□□ 2.49
CDC42SE2-207ENST00000504701 RC3H1Q5TC82 1133 aaKnown RBP30.59■■■□□ 2.49
CDC42SE2-207ENST00000504701 ARHGEF1Q92888 912 aaKnown RBP30.59■■■□□ 2.49
CDC42SE2-207ENST00000504701 CD2APQ9Y5K6 639 aa30.59■■■□□ 2.49
CDC42SE2-207ENST00000504701 TRAPPC3LQ5T215 181 aa30.58■■■□□ 2.49
CDC42SE2-207ENST00000504701 CRKLP46109 303 aaKnown RBP30.57■■■□□ 2.48
CDC42SE2-207ENST00000504701 KCPQ6ZWJ8 1503 aa30.57■■■□□ 2.48
CDC42SE2-207ENST00000504701 RPS6KA4O75676 772 aa30.56■■■□□ 2.48
CDC42SE2-207ENST00000504701 MMP10P09238 476 aa30.56■■■□□ 2.48
CDC42SE2-207ENST00000504701 DNAJC10Q8IXB1 793 aa30.54■■■□□ 2.48
CDC42SE2-207ENST00000504701 KIAA1551Q9HCM1 1747 aa30.53■■■□□ 2.48
CDC42SE2-207ENST00000504701 GYS1P13807 737 aa30.52■■■□□ 2.48
CDC42SE2-207ENST00000504701 SRP68Q9UHB9 627 aaKnown RBP30.52■■■□□ 2.48
CDC42SE2-207ENST00000504701 PPP2R1AP30153 589 aa30.51■■■□□ 2.47
CDC42SE2-207ENST00000504701 INTS5Q6P9B9 1019 aaKnown RBP30.51■■■□□ 2.47
CDC42SE2-207ENST00000504701 N4BP2Q86UW6 1770 aaPredicted RBP30.51■■■□□ 2.47
CDC42SE2-207ENST00000504701 UBR2Q8IWV8 1755 aa30.51■■■□□ 2.47
CDC42SE2-207ENST00000504701 KIF13BQ9NQT8 1826 aa30.5■■■□□ 2.47
CDC42SE2-207ENST00000504701 SIPA1L3O60292 1781 aaPredicted RBP30.49■■■□□ 2.47
CDC42SE2-207ENST00000504701 ADRA2BP18089 450 aa30.49■■■□□ 2.47
CDC42SE2-207ENST00000504701 RFC4P35249 363 aa30.49■■■□□ 2.47
CDC42SE2-207ENST00000504701 PHACTR3Q96KR7 559 aa30.49■■■□□ 2.47
CDC42SE2-207ENST00000504701 IL17REQ8NFR9 667 aa30.47■■■□□ 2.47
CDC42SE2-207ENST00000504701 PRKAR2BP31323 418 aa30.46■■■□□ 2.47
CDC42SE2-207ENST00000504701 RSPH6AQ9H0K4 717 aa30.46■■■□□ 2.47
CDC42SE2-207ENST00000504701 PXDNLA1KZ92 1463 aa30.45■■■□□ 2.47
CDC42SE2-207ENST00000504701 GRIN3BO60391 1043 aa30.44■■■□□ 2.46
CDC42SE2-207ENST00000504701 CYP19A1P11511 503 aaPredicted RBP30.44■■■□□ 2.46
CDC42SE2-207ENST00000504701 NLGN1Q8N2Q7 840 aa30.44■■■□□ 2.46
CDC42SE2-207ENST00000504701 FKBP8Q14318 412 aa30.43■■■□□ 2.46
CDC42SE2-207ENST00000504701 C10orf71Q711Q0 1435 aa30.43■■■□□ 2.46
CDC42SE2-207ENST00000504701 CFAP53Q96M91 514 aa30.43■■■□□ 2.46
CDC42SE2-207ENST00000504701 CCDC87Q9NVE4 849 aa30.43■■■□□ 2.46
CDC42SE2-207ENST00000504701 USP42Q9H9J4 1324 aaKnown RBP30.43■■■□□ 2.46
CDC42SE2-207ENST00000504701 GNAT3A8MTJ3 354 aa30.42■■■□□ 2.46
CDC42SE2-207ENST00000504701 GAS2L2Q8NHY3 880 aa30.42■■■□□ 2.46
CDC42SE2-207ENST00000504701 ZBTB1Q9Y2K1 713 aa30.41■■■□□ 2.46
CDC42SE2-207ENST00000504701 SOS1Q07889 1333 aaPredicted RBP30.41■■■□□ 2.46
CDC42SE2-207ENST00000504701 DDR1Q08345 913 aa30.39■■■□□ 2.46
CDC42SE2-207ENST00000504701 U2AF1L5P0DN76 240 aaPredicted RBP30.38■■■□□ 2.45
CDC42SE2-207ENST00000504701 U2AF1Q01081 240 aaKnown RBP eCLIP30.38■■■□□ 2.45
CDC42SE2-207ENST00000504701 A0A0G2JLW4 131 aa30.37■■■□□ 2.45
CDC42SE2-207ENST00000504701 ZNF496Q96IT1 587 aaPredicted RBP30.37■■■□□ 2.45
CDC42SE2-207ENST00000504701 PARP3Q9Y6F1 533 aa30.37■■■□□ 2.45
CDC42SE2-207ENST00000504701 KCNQ3O43525 872 aa30.36■■■□□ 2.45
CDC42SE2-207ENST00000504701 TEFQ10587 303 aa30.36■■■□□ 2.45
CDC42SE2-207ENST00000504701 USPL1Q5W0Q7 1092 aa30.36■■■□□ 2.45
CDC42SE2-207ENST00000504701 CEMIPQ8WUJ3 1361 aa30.36■■■□□ 2.45
CDC42SE2-207ENST00000504701 BRCA1P38398 1863 aaKnown RBP30.36■■■□□ 2.45
CDC42SE2-207ENST00000504701 COL15A1P39059 1388 aa30.35■■■□□ 2.45
CDC42SE2-207ENST00000504701 TTC5Q8N0Z6 440 aa30.34■■■□□ 2.45
CDC42SE2-207ENST00000504701 NUDCQ9Y266 331 aa30.34■■■□□ 2.45
CDC42SE2-207ENST00000504701 DPEP1P16444 411 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms